Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 Z99127.2-201ENST00000441426 334 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 RRM2P4-201ENST00000441721 562 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 EIF2S2P4-201ENST00000461070 984 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 PPIAP15-201ENST00000479662 484 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 RN7SL323P-201ENST00000494712 295 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 ARL4AP1-201ENST00000503220 705 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC023632.4-201ENST00000517783 191 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC004241.3-201ENST00000611728 517 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC009032.1-201ENST00000617574 431 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 FP236240.3-201ENST00000623061 327 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AL356863.1-201ENST00000623378 1080 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC124312.6-202ENST00000623624 418 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC034229.5-201ENST00000624258 185 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 RNU1-108P-201ENST00000362556 161 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 MIR421-201ENST00000365696 85 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 MIR30B-201ENST00000384850 88 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 RPL5P19-201ENST00000404228 893 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL450992.3-201ENST00000413192 568 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 PTMAP3-201ENST00000447474 330 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL513343.1-201ENST00000451818 792 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL133244.1-201ENST00000456007 258 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 SNORA84-201ENST00000459229 133 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL139099.1-201ENST00000497398 403 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 RNU6-352P-201ENST00000516908 107 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 RNU1-45P-201ENST00000517191 141 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC087369.1-201ENST00000520775 996 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL118556.2-201ENST00000614375 824 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL773545.4-201ENST00000637262 310 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL513478.4-201ENST00000641636 310 ntBASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMIM28A0A1B0GU29 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC006042.3-201ENST00000454684 1469 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC027290.2-201ENST00000623210 18662 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 MIR554-201ENST00000384874 96 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 MTND3P20-201ENST00000407663 186 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 RNA5SP146-201ENST00000410743 123 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 RPL7AP73-201ENST00000413490 353 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 MTCO1P57-201ENST00000432182 261 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC083863.1-201ENST00000438811 231 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC022431.1-201ENST00000450941 438 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 TPRKBP1-201ENST00000456243 481 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC007688.1-201ENST00000475592 759 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 RPL21P6-201ENST00000479171 504 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC025554.1-201ENST00000505641 188 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 RFPL4AP5-201ENST00000514977 504 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 RN7SKP141-201ENST00000516167 338 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 CYCSP30-201ENST00000546447 172 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC012414.2-201ENST00000559474 187 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC007620.3-201ENST00000608131 497 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AL139089.1-201ENST00000620372 975 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC073530.2-201ENST00000623987 261 ntBASIC4.24□□□□□ -1.73
SMIM28A0A1B0GU29 AC119674.1-220ENST00000641502 1048 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 276.4 ms