Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.65□□□□□ -1.35
PCDHB11Q9Y5F2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 RPL24P4-201ENST00000326586 421 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 Y_RNA.187-201ENST00000363918 113 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 Y_RNA.367-201ENST00000365544 101 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-1106P-201ENST00000390845 107 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 PRRC2CP1-201ENST00000404428 159 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 METTL15P3-201ENST00000415522 1221 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 THEM7P-201ENST00000419556 672 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 RPL7AP51-201ENST00000422016 760 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AL139184.1-202ENST00000422303 222 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 RPS20P5-201ENST00000434808 360 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 HSPE1P28-201ENST00000443139 211 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 EEF1B2P3-201ENST00000447718 678 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 RPL5P22-201ENST00000480199 884 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AC091885.1-201ENST00000506658 268 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SKP98-201ENST00000517070 156 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 ZNF705CP-201ENST00000530515 889 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 HMGB1P42-201ENST00000532126 553 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 SNORA70D-201ENST00000578836 135 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AC105224.1-201ENST00000587055 421 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AC245389.1-201ENST00000605141 529 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AL512329.1-201ENST00000404600 1592 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AC011493.1-201ENST00000596753 1632 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AC005261.2-201ENST00000593427 4258 ntBASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB11Q9Y5F2 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 OR1S2-201ENST00000302592 978 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-522P-201ENST00000364497 107 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-1013P-201ENST00000384180 107 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-729P-201ENST00000384399 107 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 SNORA7A-201ENST00000384765 139 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AL356421.1-201ENST00000403255 413 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RPL36AP36-201ENST00000418616 301 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC234781.4-201ENST00000419384 244 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RPS15AP30-201ENST00000420976 390 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC012075.1-201ENST00000436549 580 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RPL12P11-201ENST00000439970 501 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AL137792.2-201ENST00000443484 235 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC091685.2-201ENST00000454924 864 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC083806.1-201ENST00000468934 316 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 UOX-201ENST00000471089 899 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC093267.1-201ENST00000489176 961 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SL568P-201ENST00000493069 298 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC096754.1-201ENST00000508904 818 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 AC004062.1-201ENST00000509926 645 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 SMURF2P1-201ENST00000514992 481 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-864P-201ENST00000516256 108 ntBASIC6.63□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-264P-201ENST00000517134 104 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms