Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC046144.1-201ENST00000478559 1853 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AL034370.1-201ENST00000397254 1590 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 RNU6-1214P-201ENST00000363650 109 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 snoZ40.1-201ENST00000364540 72 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 SNORD116.1-201ENST00000365628 92 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 OR1L1-202ENST00000373686 1083 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 VDAC2P1-201ENST00000399358 958 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 MTND5P25-201ENST00000430499 799 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 RPL21P110-201ENST00000433345 446 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 PSMD10P3-201ENST00000437000 448 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 RPS7P5-201ENST00000441482 581 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC073648.4-201ENST00000442655 781 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 OR52J1P-201ENST00000450596 932 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 MRPL42P4-201ENST00000453267 443 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AURKAPS2-201ENST00000454983 333 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 RNA5SP103-201ENST00000459503 118 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 RPL7P16-201ENST00000479738 738 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC090686.1-201ENST00000481577 749 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC084024.2-201ENST00000503480 791 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 IGBP1P5-201ENST00000507524 1000 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC118282.2-201ENST00000508739 374 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AL671862.1-201ENST00000515851 349 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 RNU6-416P-201ENST00000516265 103 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 RNA5SP392-201ENST00000516905 112 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC051619.2-201ENST00000559063 397 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AADACP1-206ENST00000561502 1193 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 BGLT3-201ENST00000564523 994 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC090751.1-201ENST00000566966 267 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC022662.1-201ENST00000580252 331 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC133644.2-201ENST00000608142 540 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC015871.5-202ENST00000623252 701 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 AC016717.3-201ENST00000624730 554 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 ATE1-AS1-202ENST00000636460 506 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 MFSD8-245ENST00000641743 948 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
PKP3Q9Y446 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 AL359922.3-201ENST00000624779 1670 ntBASIC4.83□□□□□ -1.64
PKP3Q9Y446 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKP3Q9Y446 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP3Q9Y446 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKP3Q9Y446 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKP3Q9Y446 TLK1P1-201ENST00000456760 2440 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 SMG1P6-201ENST00000532337 2930 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP3Q9Y446 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP3Q9Y446 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PKP3Q9Y446 RN7SKP149-201ENST00000363008 344 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PKP3Q9Y446 AL109941.1-201ENST00000401925 229 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 AL359643.1-201ENST00000404109 423 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 LINC00993-201ENST00000420453 540 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 RGS17P1-201ENST00000423358 553 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 AC007559.1-201ENST00000428736 355 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 CNOT7P1-201ENST00000429006 852 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 MTCO1P3-201ENST00000429327 192 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 SETP8-201ENST00000435341 628 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.82□□□□□ -1.64
PKP3Q9Y446 YWHAQP9-201ENST00000445891 512 ntBASIC4.82□□□□□ -1.64
PKP3Q9Y446 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms