Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AL034351.1-201ENST00000605288 668 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AP001033.2-201ENST00000609701 1003 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 ATE1-AS1-202ENST00000636460 506 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC083865.1-201ENST00000636634 831 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 MIR1910-201ENST00000636955 80 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC090229.1-201ENST00000590983 1609 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 MTCO1P14-201ENST00000441695 1559 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MTATP6P31-201ENST00000406985 692 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 EIF1P3-201ENST00000423841 334 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AL365396.1-201ENST00000430854 671 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC023347.2-201ENST00000433994 462 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 RPS27P5-201ENST00000444247 244 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 YWHAQP9-201ENST00000445891 512 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 OR52J1P-201ENST00000450596 932 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC108729.2-201ENST00000476543 840 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 RN7SL812P-201ENST00000493791 279 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 RPL37AP8-201ENST00000494116 276 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 HMGB1P21-201ENST00000502313 581 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MTATP6P22-201ENST00000507369 598 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 OR5H4P-201ENST00000510851 923 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC008562.1-201ENST00000521763 330 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 OR5AZ1P-201ENST00000527448 943 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 GCSHP4-201ENST00000538792 439 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 LINC00557-201ENST00000563184 1279 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC090751.1-201ENST00000566966 267 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MIR4458-201ENST00000578872 75 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MIR5010-201ENST00000582846 120 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AC069304.3-201ENST00000603938 1084 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 KATNBL1P5-201ENST00000605015 517 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MIR6778-201ENST00000617912 73 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AL713922.2-201ENST00000619384 716 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 MIR7702-201ENST00000621931 59 ntBASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCNIP3Q9Y2W7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 RNA5SP322-201ENST00000363617 119 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 RNU2-65P-201ENST00000410162 185 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 RHEBP3-201ENST00000411920 351 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 TATDN1P1-201ENST00000414123 891 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 AC017083.1-201ENST00000428093 483 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 AL049745.1-201ENST00000433953 286 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 USP9YP7-201ENST00000436723 430 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 MTCYBP21-201ENST00000443300 1113 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 USP9YP32-201ENST00000452432 430 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 RPS27AP17-201ENST00000463344 455 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 HIGD1AP14-201ENST00000507617 282 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 SETP12-201ENST00000514068 805 ntBASIC3.63□□□□□ -1.83
KCNIP3Q9Y2W7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms