Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 HMGB1P16-201ENST00000447155 540 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 RPS6P4-201ENST00000494693 758 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 AC022695.1-201ENST00000522089 237 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 DYNLL1P4-201ENST00000549314 266 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 AL451044.1-201ENST00000604867 238 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 AC015722.2-201ENST00000622210 551 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 MFSD8-236ENST00000641509 4050 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 MIR30B-201ENST00000384850 88 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 MIR554-201ENST00000384874 96 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 USP12PY-201ENST00000427677 1064 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AL445584.1-201ENST00000431451 330 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 NANOGP10-201ENST00000453325 895 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 RPL23AP12-201ENST00000467573 473 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC146944.2-203ENST00000502493 354 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC139495.1-202ENST00000513164 354 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 RNA5SP497-201ENST00000516081 97 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 RNA5SP154-201ENST00000516193 111 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AL133457.1-201ENST00000564251 987 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC022655.2-201ENST00000577280 318 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 MIR3158-1-201ENST00000583596 81 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 RNU1-30P-201ENST00000606575 163 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 MIR92B-201ENST00000607575 96 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC006504.1-201ENST00000562493 3666 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC093775.1-201ENST00000624154 1868 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 RNA5SP44-201ENST00000410446 133 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AL391219.1-201ENST00000422570 483 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AL139099.1-201ENST00000497398 403 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC063950.1-201ENST00000552036 308 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 GNRHR2P1-201ENST00000555315 631 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 OR1AB1P-201ENST00000585564 761 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 AC018555.1-201ENST00000567548 1980 ntBASIC3.73□□□□□ -1.81
CCDC88CQ9P219 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CCDC88CQ9P219 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 RPL21P17-201ENST00000397467 475 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 MTND2P11-201ENST00000423638 648 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 RN7SL323P-201ENST00000494712 295 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 AC138409.2-202ENST00000507274 458 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 NDUFB4P12-201ENST00000513465 390 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 AC022968.1-201ENST00000567372 442 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 HNRNPCP4-201ENST00000571636 900 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 AC079684.1-201ENST00000621405 437 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 AL161637.1-201ENST00000622380 412 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC88CQ9P219 CDC27P2-201ENST00000425026 1922 ntBASIC3.72□□□□□ -1.81
CCDC88CQ9P219 OR10J6P-201ENST00000289731 930 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 MIR708-201ENST00000390708 88 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 SNORA48.7-201ENST00000391302 135 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 FABP3P2-201ENST00000453169 399 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AC008155.2-201ENST00000464337 397 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 SYT14P1-201ENST00000481459 721 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 RPS3AP50-201ENST00000487064 803 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 HMGB3P13-201ENST00000511263 607 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AL592436.1-201ENST00000605135 558 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AC245389.1-201ENST00000605141 529 ntBASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC88CQ9P219 AC015813.6-201ENST00000624409 5808 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms