Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 DYNLL1P7-201ENST00000429273 258 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AL138878.2-201ENST00000440581 1241 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 MTCO3P11-201ENST00000455103 774 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC005229.2-201ENST00000456995 399 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 RNU6-1218P-201ENST00000458990 108 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 RN7SL738P-201ENST00000470264 297 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC010350.1-201ENST00000504908 231 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 GAPDHP56-201ENST00000506031 988 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC008885.2-201ENST00000509506 930 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 OR7H2P-201ENST00000513483 306 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 snoU109.6-201ENST00000516831 118 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 FTH1P11-201ENST00000517577 551 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 HIGD1AP6-201ENST00000521833 279 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC004217.3-201ENST00000551552 878 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 UBE2FP2-201ENST00000566646 462 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC135628.1-201ENST00000568867 534 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 MIR4270-201ENST00000581799 70 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC124312.4-201ENST00000605533 310 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AL161616.1-201ENST00000611867 286 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC243654.2-201ENST00000612843 443 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC092140.2-201ENST00000618027 521 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL445437.1-201ENST00000623157 3087 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 FAM3C2-201ENST00000312214 681 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 IL6STP1-201ENST00000346911 1020 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC013442.1-201ENST00000397347 228 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 RPS4XP9-201ENST00000405151 780 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL121878.1-201ENST00000418638 859 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 OR52J1P-201ENST00000450596 932 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 IGHV5-78-201ENST00000450948 295 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC097262.1-201ENST00000452559 548 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC005912.1-201ENST00000495392 255 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 CEACAMP10-202ENST00000495431 496 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 OR51K1P-201ENST00000510214 950 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC108043.1-201ENST00000512696 574 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC068714.1-201ENST00000559623 800 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 GTF2IP8-201ENST00000560687 584 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC234771.5-201ENST00000600161 514 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AP001521.2-201ENST00000608772 546 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC097505.1-201ENST00000610199 565 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 MIR6133-201ENST00000617057 108 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTA1Q9NP79 AL359757.1-201ENST00000623176 255 ntBASIC5.73□□□□□ -1.49
VTA1Q9NP79 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms