Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU1-108P-201ENST00000362556 161 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 RNU6-213P-201ENST00000384051 104 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 RNA5SP105-201ENST00000391123 113 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AL139039.2-201ENST00000407436 479 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 TCEA1P4-201ENST00000415066 844 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 EIF4EP1-201ENST00000422311 642 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AC044797.1-201ENST00000445744 679 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 RAB28P3-201ENST00000448325 597 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 RNU6-775P-201ENST00000459318 96 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 APOOP2-201ENST00000461561 539 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 GAPDHP36-201ENST00000480688 918 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AC079171.1-201ENST00000568788 914 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 MIR432-201ENST00000606207 94 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 AC007342.9-201ENST00000623877 1385 ntBASIC4.35□□□□□ -1.71
NXF3Q9H4D5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 MARK2P15-201ENST00000432204 2186 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RNA5SP399-201ENST00000364003 117 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 MIR554-201ENST00000384874 96 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 HMGB3P19-201ENST00000403971 560 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RN7SKP159-201ENST00000410657 292 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 HMGB3P5-201ENST00000428894 612 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AL445584.1-201ENST00000431451 330 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 UBE2V2P3-201ENST00000433562 437 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RRM2P4-201ENST00000441721 562 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RPS26P28-201ENST00000470806 348 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC007537.2-201ENST00000472093 511 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RNU6-352P-201ENST00000516908 107 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RNA5SP179-201ENST00000517284 121 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC025857.1-201ENST00000525252 377 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC124068.1-201ENST00000563131 678 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC007599.1-201ENST00000568688 1174 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 MIR5685-201ENST00000579080 79 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC091167.4-201ENST00000605079 184 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AL031666.3-201ENST00000609320 1006 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC090912.3-201ENST00000609775 533 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC015922.4-201ENST00000612568 690 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 LINC00901.1-201ENST00000617252 152 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 AC034229.5-201ENST00000624258 185 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 OR10AB1P-202ENST00000641219 1686 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 HSPD1P11-201ENST00000508643 1702 ntBASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NXF3Q9H4D5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.34□□□□□ -1.72
NXF3Q9H4D5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NXF3Q9H4D5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
NXF3Q9H4D5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.33□□□□□ -1.72
NXF3Q9H4D5 AL359837.1-201ENST00000381357 287 ntBASIC4.33□□□□□ -1.72
NXF3Q9H4D5 SNORA48.7-201ENST00000391302 135 ntBASIC4.33□□□□□ -1.72
NXF3Q9H4D5 AC093719.1-202ENST00000392735 373 ntBASIC4.33□□□□□ -1.72
NXF3Q9H4D5 RPS20P25-201ENST00000412447 352 ntBASIC4.33□□□□□ -1.72
NXF3Q9H4D5 MTND4LP13-201ENST00000425022 298 ntBASIC4.33□□□□□ -1.72
NXF3Q9H4D5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms