Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AL138785.1-201ENST00000425821 331 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC104837.2-201ENST00000427236 424 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AL772161.1-201ENST00000439130 476 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC069540.1-201ENST00000446320 988 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC104687.1-201ENST00000485829 412 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC111193.1-201ENST00000504097 155 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 CIR1P1-201ENST00000524055 1133 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC025918.2-201ENST00000558683 763 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 MTND4LP24-201ENST00000572277 291 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC024940.4-201ENST00000605507 246 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 U6.48-201ENST00000618523 106 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC095038.2-201ENST00000621464 1070 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AL049536.1-201ENST00000625043 744 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 BMS1P21-201ENST00000634565 365 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 METTL21EP-201ENST00000298105 713 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 SNORD113.2-201ENST00000364166 89 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 GAPDHP49-201ENST00000421421 961 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 EIF1P3-201ENST00000423841 334 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 FTH1P16-201ENST00000435241 552 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 HMGB3P22-202ENST00000451823 572 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 SBDSP1-204ENST00000453858 737 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 RPL21P126-201ENST00000470049 478 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC010683.1-201ENST00000473673 378 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC011037.1-201ENST00000483964 558 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC025260.1-201ENST00000548858 430 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC106785.3-201ENST00000564064 847 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 RN7SL690P-201ENST00000582087 240 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC018618.2-201ENST00000604770 446 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 KATNBL1P5-201ENST00000605015 517 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 MIR7702-201ENST00000621931 59 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 AC018555.1-201ENST00000567548 1980 ntBASIC4.41□□□□□ -1.7
DDX47Q9H0S4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX47Q9H0S4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX47Q9H0S4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
DDX47Q9H0S4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
DDX47Q9H0S4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
DDX47Q9H0S4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX47Q9H0S4 MIR331-201ENST00000362302 94 ntBASIC4.4□□□□□ -1.71
DDX47Q9H0S4 SNORA70F-201ENST00000384142 135 ntBASIC4.4□□□□□ -1.71
DDX47Q9H0S4 AL590290.1-201ENST00000405336 380 ntBASIC4.4□□□□□ -1.71
DDX47Q9H0S4 AL139128.1-201ENST00000413921 941 ntBASIC4.4□□□□□ -1.71
DDX47Q9H0S4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.4□□□□□ -1.71
DDX47Q9H0S4 TCEA1P4-201ENST00000415066 844 ntBASIC4.4□□□□□ -1.71
DDX47Q9H0S4 TMSB10P2-201ENST00000416049 131 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms