Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 RHOT1P2-201ENST00000366423 333 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 MIR93-201ENST00000385024 80 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AC136624.1-201ENST00000400791 413 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AL121834.1-202ENST00000404494 277 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AP000357.1-201ENST00000409926 1165 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AL160275.2-201ENST00000412010 394 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 RPL23AP26-201ENST00000412728 464 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 DPY19L1P2-201ENST00000426647 915 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 RPL23AP46-201ENST00000438548 490 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 RPL36AP13-201ENST00000457490 317 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AC010618.1-201ENST00000469924 477 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AC005912.1-201ENST00000495392 255 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AC106806.2-201ENST00000509365 500 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AC022655.2-201ENST00000577280 318 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 AL445567.2-201ENST00000618935 498 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 OR52H1-202ENST00000641796 1061 ntBASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 COX6B1P7-201ENST00000430845 235 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 ELOCP8-201ENST00000439309 332 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 ELOCP15-201ENST00000442090 332 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 RPL23AP12-201ENST00000467573 473 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AF213884.1-201ENST00000488102 463 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 HMGB1P3-201ENST00000502802 616 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC108475.1-201ENST00000507880 950 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 RNU6-751P-201ENST00000516382 101 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 VTA1P2-201ENST00000520205 911 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 HIGD1AP18-201ENST00000520730 278 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC023575.1-201ENST00000580510 358 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC006116.5-201ENST00000591936 559 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC090953.1-201ENST00000604305 1092 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC015813.4-201ENST00000610469 179 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 MIR7151-201ENST00000617477 60 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AC007342.8-201ENST00000623278 678 ntBASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
CCSER1Q9C0I3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CCSER1Q9C0I3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.66
CCSER1Q9C0I3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.65□□□□□ -1.66
CCSER1Q9C0I3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CCSER1Q9C0I3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCSER1Q9C0I3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 AL049693.1-201ENST00000402760 611 ntBASIC4.65□□□□□ -1.67
CCSER1Q9C0I3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms