Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDK5RAP1Q96SZ6 AL022322.2-201ENST00000624072 20397 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 C4BPAP1-201ENST00000415474 1893 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 RNU6-697P-201ENST00000363348 107 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 SNORA72.1-201ENST00000363485 129 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 RNA5SP187-201ENST00000384400 119 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 RNU6-114P-201ENST00000384704 105 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 HMGN1P14-201ENST00000412459 517 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 XKRYP4-201ENST00000414395 483 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AL133482.1-201ENST00000415988 498 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 HMGN2P27-201ENST00000427352 270 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AL161722.2-201ENST00000434731 981 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC099670.2-201ENST00000435130 321 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC007327.1-201ENST00000447461 264 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AL627224.1-201ENST00000448334 444 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 XKRYP5-201ENST00000449659 483 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 TPMTP4-201ENST00000450749 678 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 CYCSP42-201ENST00000450823 238 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 RPL31P58-201ENST00000469001 379 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 RN7SL222P-201ENST00000476452 299 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 RN7SL727P-201ENST00000482164 296 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC069528.1-202ENST00000482888 637 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 OR11I1P-201ENST00000486033 954 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 OR4G11P-201ENST00000492842 939 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 RPL15P21-201ENST00000495592 567 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 FCF1P3-201ENST00000496394 590 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 SNRPCP2-201ENST00000504370 475 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC106038.2-201ENST00000520706 568 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 OR11J2P-201ENST00000555298 907 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC133552.5-201ENST00000604266 540 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 IMMP1LP1-201ENST00000605170 488 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC090517.2-201ENST00000614966 680 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC012150.2-201ENST00000621300 544 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AP002505.2-201ENST00000623585 696 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AL137100.1-201ENST00000556703 1620 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AC104964.3-201ENST00000606115 2860 ntBASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP1Q96SZ6 TTC39DP-201ENST00000416781 1688 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC011477.1-204ENST00000623416 1325 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 MTND5P17-201ENST00000418405 1603 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 RNU1-87P-201ENST00000363727 170 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 OR4K12P-201ENST00000406538 961 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AL512430.2-201ENST00000406786 339 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms