Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 SEPT7P5-201ENST00000434048 306 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 FMO7P-201ENST00000436045 768 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 MTND4P6-201ENST00000438297 472 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 MTCO2P25-201ENST00000447065 681 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AP000936.2-201ENST00000447151 681 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC104306.1-201ENST00000449702 371 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 OR52J1P-201ENST00000450596 932 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 DNAJB5P1-201ENST00000454004 806 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 RN7SL515P-201ENST00000463999 297 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 SIAH1P1-201ENST00000479411 923 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC068724.1-201ENST00000487100 792 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC022133.1-201ENST00000490961 571 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 HMGB3P16-201ENST00000508037 287 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC005178.1-201ENST00000508392 440 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 HMGB1P44-201ENST00000508597 572 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 HSPE1P23-201ENST00000509838 286 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC079395.1-201ENST00000510981 262 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 HMGB3P13-201ENST00000511263 607 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC109445.1-201ENST00000512356 383 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC022882.1-201ENST00000532142 501 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC090751.1-201ENST00000566966 267 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC007599.1-201ENST00000568688 1174 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC012435.1-202ENST00000568772 240 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC245297.2-201ENST00000610119 565 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 SDR42E1P1-201ENST00000611327 477 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC023158.2-201ENST00000614876 543 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC016717.3-201ENST00000624730 554 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 OR51H2P-202ENST00000641424 3046 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SNX18Q96RF0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SNX18Q96RF0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.84□□□□□ -1.64
SNX18Q96RF0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX18Q96RF0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX18Q96RF0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX18Q96RF0 Z99496.1-201ENST00000469424 1477 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX18Q96RF0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 AC092104.1-201ENST00000497346 1441 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 AC114786.1-201ENST00000512892 1415 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX18Q96RF0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX18Q96RF0 RNA5SP132-201ENST00000364725 118 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 RN7SKP153-201ENST00000365026 316 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 RNU4-2-201ENST00000365668 141 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 Y_RNA.559-201ENST00000384686 107 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 MIR1178-201ENST00000408396 91 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX18Q96RF0 RN7SKP125-201ENST00000410481 302 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 OR51A3P-201ENST00000413596 924 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 NPM1P4-201ENST00000414095 812 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 Z93019.1-201ENST00000416450 973 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 NPM1P11-201ENST00000417106 855 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 AL355433.1-201ENST00000422804 300 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 AL022400.1-201ENST00000423946 935 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 AL353706.1-201ENST00000436728 494 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 AC093155.1-201ENST00000440164 826 ntBASIC4.83□□□□□ -1.64
SNX18Q96RF0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX18Q96RF0 RFC5P1-201ENST00000454419 874 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms