Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC107083.1-201ENST00000439643 279 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 RPL32P28-201ENST00000443577 397 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 RAB28P3-201ENST00000448325 597 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 RAD23BP3-201ENST00000454157 1152 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC006517.1-201ENST00000480485 328 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AL121603.1-201ENST00000553815 142 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC019278.1-201ENST00000623516 479 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC068870.3-201ENST00000625077 2536 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 OSTCP5-201ENST00000425293 453 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 VN1R25P-201ENST00000443385 738 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 BX276092.4-201ENST00000452056 248 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC007599.1-201ENST00000568688 1174 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 RPL23AP87-202ENST00000573039 466 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 ZNF807-201ENST00000328088 1707 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 SNORD35B-201ENST00000363660 87 ntBASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 RPS26P2-201ENST00000440331 348 ntBASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 RPL21P11-201ENST00000461458 483 ntBASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 AC135001.1-201ENST00000544546 283 ntBASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 RPL21P7-201ENST00000557463 483 ntBASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.15□□□□□ -1.9
CSMD1Q96PZ7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 MIR5186-201ENST00000577504 120 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 MIR3162-201ENST00000581818 82 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 SAMMSON-213ENST00000641336 1521 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 SRP72P2-201ENST00000344851 1979 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 RNU4-82P-201ENST00000362443 140 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 VDAC1P9-201ENST00000412766 841 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 BX890604.2-201ENST00000427883 474 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 RANP8-201ENST00000444720 713 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 STMN1P2-201ENST00000508435 439 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 AC087276.1-201ENST00000529659 480 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 AC023509.5-201ENST00000617434 807 ntBASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC3.15□□□□□ -1.91
CSMD1Q96PZ7 NOL8P1-201ENST00000508336 3529 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 DHX9P1-201ENST00000436565 3076 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AL079342.1-201ENST00000401460 267 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 BX323014.1-201ENST00000412876 237 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AL121878.1-201ENST00000418638 859 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC090151.1-201ENST00000520784 730 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC103881.1-201ENST00000603476 538 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC112503.1-201ENST00000608436 391 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 HYDIN2-203ENST00000614586 13885 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 AC007656.2-201ENST00000624902 4547 ntBASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSMD1Q96PZ7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms