Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 SNORA3C-201ENST00000408792 125 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AP000357.1-201ENST00000409926 1165 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 CHIAP3-201ENST00000423668 1133 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 TPTE2P3-201ENST00000441562 1189 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 HMGB1P16-201ENST00000447155 540 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 EIF2S2P4-201ENST00000461070 984 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 UQCRHP4-201ENST00000471686 272 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 PRELID3BP7-201ENST00000503606 469 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 RNA5SP519-201ENST00000516480 119 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC063950.1-201ENST00000552036 308 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AP001542.1-201ENST00000591314 200 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC068020.1-201ENST00000594215 661 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC020914.4-201ENST00000597690 277 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 RPL23AP61-201ENST00000623642 466 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL21A1Q96P44 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC074029.4-201ENST00000624796 1859 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL21A1Q96P44 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL21A1Q96P44 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC083899.2-201ENST00000423285 1376 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 CCT8P1-201ENST00000413611 1657 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 FAM3C2-201ENST00000312214 681 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 SNORA62-201ENST00000365493 153 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC093719.1-202ENST00000392735 373 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 OR6C69P-201ENST00000394268 893 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AL603766.1-201ENST00000407763 664 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 MTCO3P21-201ENST00000430791 643 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC092013.1-201ENST00000438795 332 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 RAD1P2-201ENST00000446414 663 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 EEF1A1P1-201ENST00000447052 739 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 RAD23BP3-201ENST00000454157 1152 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC041039.1-201ENST00000485656 536 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC018797.3-201ENST00000513388 1241 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC023575.1-201ENST00000580510 358 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 MIR3138-201ENST00000585238 82 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC123786.2-201ENST00000603459 275 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AL139286.1-201ENST00000604465 483 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC005021.1-201ENST00000608730 355 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 MLECP1-201ENST00000615893 709 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 AC019080.5-201ENST00000624891 757 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 MIR3653-201ENST00000625572 110 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 OR11H5P-202ENST00000641612 1325 ntBASIC3.91□□□□□ -1.78
COL21A1Q96P44 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
COL21A1Q96P44 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL21A1Q96P44 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL21A1Q96P44 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL21A1Q96P44 AC093311.1-201ENST00000506586 2021 ntBASIC3.9□□□□□ -1.78
COL21A1Q96P44 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL21A1Q96P44 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
COL21A1Q96P44 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
COL21A1Q96P44 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COL21A1Q96P44 AC126755.2-208ENST00000327792 462 ntBASIC3.9□□□□□ -1.79
COL21A1Q96P44 AC138969.1-213ENST00000331436 462 ntBASIC3.9□□□□□ -1.79
COL21A1Q96P44 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.9□□□□□ -1.79
COL21A1Q96P44 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms