Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.42□□□□□ -1.54
USP47Q96K76 AC087650.1-201ENST00000431445 468 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 NOTCH2P1-201ENST00000443481 624 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.42□□□□□ -1.54
USP47Q96K76 NANOGP10-201ENST00000453325 895 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 RPL21P11-201ENST00000461458 483 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 OR4A2P-201ENST00000527276 913 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 AL390816.3-201ENST00000604527 1066 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC244517.3-201ENST00000616254 1235 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AL139089.1-201ENST00000620372 975 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP47Q96K76 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP47Q96K76 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USP47Q96K76 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP47Q96K76 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP47Q96K76 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP47Q96K76 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.41□□□□□ -1.54
USP47Q96K76 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP47Q96K76 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.41□□□□□ -1.54
USP47Q96K76 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
USP47Q96K76 SNORA73.2-201ENST00000364946 201 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 U8.11-201ENST00000384699 133 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 U8.12-201ENST00000384701 133 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 RNA5SP104-201ENST00000410989 118 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 RAB9AP3-201ENST00000412737 573 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 JKAMPP1-201ENST00000413804 919 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 AC096638.2-201ENST00000434965 711 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP47Q96K76 AC073587.1-201ENST00000447093 876 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 RAB9AP1-201ENST00000449393 573 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.41□□□□□ -1.54
USP47Q96K76 U8.18-201ENST00000459285 133 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 ACTR3P3-201ENST00000480448 893 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.41□□□□□ -1.54
USP47Q96K76 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.41□□□□□ -1.54
USP47Q96K76 RN7SL339P-201ENST00000580597 296 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.41□□□□□ -1.54
USP47Q96K76 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.41□□□□□ -1.54
USP47Q96K76 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.41□□□□□ -1.54
USP47Q96K76 AC015908.5-201ENST00000623289 343 ntBASIC5.41□□□□□ -1.54
USP47Q96K76 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP47Q96K76 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
USP47Q96K76 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP47Q96K76 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP47Q96K76 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
USP47Q96K76 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP47Q96K76 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.4□□□□□ -1.55
USP47Q96K76 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP47Q96K76 OR4A15-201ENST00000314706 1035 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
USP47Q96K76 MIR30B-201ENST00000384850 88 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP47Q96K76 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP47Q96K76 HMGB3P22-202ENST00000451823 572 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 RPS26P15-201ENST00000488067 348 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 AL139099.1-201ENST00000497398 403 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 DSTNP2-201ENST00000504533 515 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.4□□□□□ -1.55
USP47Q96K76 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.4□□□□□ -1.55
USP47Q96K76 HMGB1P19-201ENST00000517578 577 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 AC008802.1-201ENST00000519121 791 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.4□□□□□ -1.55
USP47Q96K76 OR4A12P-201ENST00000530847 918 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 AP000619.3-201ENST00000535634 1127 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 CYCSP30-201ENST00000546447 172 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.4□□□□□ -1.55
USP47Q96K76 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.4□□□□□ -1.55
USP47Q96K76 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.4□□□□□ -1.55
USP47Q96K76 AC084757.4-201ENST00000616350 526 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 AC012314.7-201ENST00000619693 93 ntBASIC5.4□□□□□ -1.55
USP47Q96K76 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
USP47Q96K76 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.39□□□□□ -1.55
USP47Q96K76 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.39□□□□□ -1.55
USP47Q96K76 AL160275.2-201ENST00000412010 394 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.39□□□□□ -1.55
USP47Q96K76 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.39□□□□□ -1.55
USP47Q96K76 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.39□□□□□ -1.55
USP47Q96K76 AC010469.1-201ENST00000463864 576 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 RPS20P21-201ENST00000466859 343 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP47Q96K76 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.39□□□□□ -1.55
USP47Q96K76 AC093853.1-201ENST00000515689 483 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 MYL12AP1-201ENST00000518490 515 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.39□□□□□ -1.55
USP47Q96K76 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.39□□□□□ -1.55
USP47Q96K76 AC012468.1-201ENST00000604888 430 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 AC241377.1-201ENST00000619797 406 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 AC020978.9-201ENST00000624380 1141 ntBASIC5.39□□□□□ -1.55
USP47Q96K76 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.39□□□□□ -1.55
USP47Q96K76 ATE1-AS1-202ENST00000636460 506 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms