Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 XPOTP1-201ENST00000443317 2398 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 MFSD8-220ENST00000641243 1422 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 RNU1-44P-201ENST00000384453 163 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 RNU6-796P-201ENST00000391086 107 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 RPL23AP59-201ENST00000399415 461 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 GLULP6-201ENST00000399502 913 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC004690.1-201ENST00000418216 328 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC008173.1-201ENST00000418901 264 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 RPL23AP93-201ENST00000440847 484 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC092809.1-201ENST00000441469 474 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 HMGB1P48-201ENST00000446155 598 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 DDX39BP2-208ENST00000453923 258 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AL442163.2-201ENST00000553912 710 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AL049539.1-201ENST00000611964 459 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 MIR6780A-201ENST00000615089 68 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 MIR6891-201ENST00000618788 93 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AL035461.2-201ENST00000619201 524 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC067852.7-201ENST00000623270 535 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 AC132825.7-201ENST00000638744 335 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.4□□□□□ -1.7
PDLIM5Q96HC4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PDLIM5Q96HC4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.4□□□□□ -1.7
PDLIM5Q96HC4 MIR16-2-201ENST00000362117 81 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 RNU6-1339P-201ENST00000363574 91 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 U3.15-201ENST00000365398 212 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 MIR525-201ENST00000384978 85 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AL133270.1-201ENST00000402635 279 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 RN7SKP106-201ENST00000410832 272 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 RN7SKP167-201ENST00000411047 285 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 EIF4EP1-201ENST00000422311 642 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AL360081.1-201ENST00000428299 555 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AP001324.1-201ENST00000428553 399 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 RPS27AP15-201ENST00000447672 466 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 RPL7P55-201ENST00000450522 746 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AL513533.1-201ENST00000453728 415 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC104689.1-201ENST00000473356 768 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 RN7SL826P-201ENST00000479724 288 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC113430.1-201ENST00000506872 718 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC008494.2-201ENST00000514544 370 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC100770.1-201ENST00000532310 322 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 SERPINE4P-201ENST00000554978 281 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC104229.1-201ENST00000561364 255 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AP005119.2-201ENST00000579735 1105 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 ELOCP28-201ENST00000590044 317 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms