Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 Y_RNA.51-201ENST00000362725 102 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MIR143-201ENST00000385300 106 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 TAF9BP1-201ENST00000396646 746 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 NRBF2P2-201ENST00000413087 861 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC019178.2-201ENST00000423595 505 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL009174.1-201ENST00000426577 416 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MTCO1P54-201ENST00000430139 712 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC092162.1-201ENST00000432828 434 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 ATP5F1P1-201ENST00000433775 569 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL391987.1-201ENST00000441025 200 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL606662.1-201ENST00000445763 553 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 RN7SL517P-201ENST00000462240 305 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL591473.1-201ENST00000464297 313 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC096741.1-201ENST00000472250 846 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 HMGN2P25-201ENST00000486956 268 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC020890.1-201ENST00000491837 504 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 WBP1LP4-201ENST00000505043 344 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 RNU6-513P-201ENST00000516104 104 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 OR4C2P-201ENST00000530855 1064 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC024909.2-201ENST00000553035 286 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MIR4999-201ENST00000585029 91 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 VN1R90P-201ENST00000595717 726 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL139418.1-201ENST00000613613 177 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL353726.1-201ENST00000614041 1000 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC023158.2-201ENST00000614876 543 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MIR6729-201ENST00000618194 65 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL022401.1-201ENST00000619498 108 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC022106.2-201ENST00000620114 757 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MIR4302-201ENST00000638058 60 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 VPS35P1-201ENST00000563400 1518 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC093591.2-201ENST00000565254 3843 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 HMGB1P5-201ENST00000255320 642 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 SNURFL-201ENST00000309296 343 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 OR56B2P-201ENST00000317102 954 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 Y_RNA.77-201ENST00000362962 107 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 MIR16-1-201ENST00000385271 89 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 HMGB3P7-201ENST00000400214 611 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AL592291.1-201ENST00000403830 352 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 GSTA8P-201ENST00000404253 637 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AL138880.1-201ENST00000405824 642 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AF186996.5-201ENST00000418098 904 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC114814.2-201ENST00000419195 485 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC022022.1-201ENST00000430304 178 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC098826.1-201ENST00000433943 471 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 OR7E125P-201ENST00000443450 846 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AL163193.1-201ENST00000444895 788 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 MTCO2P25-201ENST00000447065 681 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC000111.2-201ENST00000448200 210 ntBASIC5.07□□□□□ -1.6
ATG4AQ8WYN0 AC009961.3-201ENST00000449832 765 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms