Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC079776.3-201ENST00000450665 370 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC034244.1-201ENST00000507687 207 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AADACP1-206ENST00000561502 1193 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 MIR5096-201ENST00000583713 70 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC123786.2-201ENST00000603459 275 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC004908.3-201ENST00000610248 625 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC083809.1-201ENST00000615051 472 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AL121890.2-201ENST00000617644 465 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC002525.1-201ENST00000624392 1622 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC092162.3-201ENST00000624511 1624 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC134882.1-201ENST00000603738 1676 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL031595.2-201ENST00000624215 19071 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL590240.1-201ENST00000334118 313 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 RPS3AP23-201ENST00000401762 784 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 GSTA8P-201ENST00000404253 637 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 PAICSP7-201ENST00000419829 962 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 RPL18P10-201ENST00000425606 538 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 COX6CP13-201ENST00000428703 226 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 RPL7P34-201ENST00000433316 712 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL359265.2-201ENST00000434367 631 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC005154.2-201ENST00000438110 379 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC092013.1-201ENST00000438795 332 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL672167.3-201ENST00000465951 960 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC004217.3-201ENST00000551552 878 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL442163.2-201ENST00000553912 710 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AL359219.2-201ENST00000555184 348 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC022662.1-201ENST00000580252 331 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC008751.2-201ENST00000597885 980 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC092954.1-201ENST00000609121 445 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC015804.1-201ENST00000622935 435 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 MTND2P41-201ENST00000637599 773 ntBASIC4.95□□□□□ -1.62
HMGB4Q8WW32 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB4Q8WW32 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.94□□□□□ -1.62
HMGB4Q8WW32 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.94□□□□□ -1.62
HMGB4Q8WW32 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGB4Q8WW32 RPL6P29-201ENST00000414863 865 ntBASIC4.94□□□□□ -1.62
HMGB4Q8WW32 AL008987.1-201ENST00000415528 237 ntBASIC4.94□□□□□ -1.62
HMGB4Q8WW32 TBCAP2-201ENST00000416175 326 ntBASIC4.94□□□□□ -1.62
HMGB4Q8WW32 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms