Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 RPL7P22-201ENST00000466005 733 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC096741.1-201ENST00000472250 846 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 RPS29P22-201ENST00000472363 168 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 RPL21P6-201ENST00000479171 504 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 RN7SL812P-201ENST00000493791 279 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC113420.1-201ENST00000507903 571 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 MTND1P22-201ENST00000510572 951 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 MTCO1P47-201ENST00000523889 1271 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 PHBP17-201ENST00000528576 541 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 TRAV8-5-201ENST00000537369 341 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AL352979.3-201ENST00000553515 247 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AL442163.2-201ENST00000553912 710 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AP005262.1-201ENST00000582646 997 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 RN7SL52P-201ENST00000584271 284 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 PIGPP4-201ENST00000584447 307 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AC107952.2-201ENST00000606048 486 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AL021997.2-201ENST00000615674 271 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 AP000346.3-201ENST00000622821 210 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 BX649567.1-201ENST00000642071 1134 ntBASIC4.68□□□□□ -1.66
LMO3Q8TAP4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
LMO3Q8TAP4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 ELOCP19-201ENST00000411919 318 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AL732292.1-201ENST00000426692 226 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC073335.1-201ENST00000427776 363 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 MTCO1P43-201ENST00000431831 488 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 RPL23AP52-201ENST00000439311 478 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC092155.2-201ENST00000454675 477 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC016687.1-201ENST00000482574 353 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC091435.1-201ENST00000505442 584 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 STMN1P2-201ENST00000508435 439 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AP000916.1-201ENST00000533869 835 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC010620.1-201ENST00000601088 1102 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC073387.2-201ENST00000604797 784 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AL353600.1-201ENST00000608148 251 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 uc_338.13-201ENST00000618243 179 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 AC105105.5-201ENST00000622635 1294 ntBASIC4.67□□□□□ -1.66
LMO3Q8TAP4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO3Q8TAP4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms