Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 IGKV7-3-201ENST00000357453 298 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RNU1-14P-201ENST00000362759 152 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 SNORA37-201ENST00000384504 129 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RPS3AP23-201ENST00000401762 784 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RNA5SP306-201ENST00000411087 107 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RBMY2KP-201ENST00000418221 992 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RPA2P2-201ENST00000419698 796 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 ELOCP8-201ENST00000439309 332 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 ELOCP15-201ENST00000442090 332 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RPL23AP24-201ENST00000458203 385 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 SYT14P1-201ENST00000481459 721 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AC013356.1-201ENST00000489027 564 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AL133372.1-201ENST00000493565 745 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 BNIP3P41-201ENST00000503774 571 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AL592156.1-201ENST00000508758 304 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RNA5SP49-201ENST00000516450 115 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 SNORD116-30-201ENST00000516468 85 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 RNA5SP73-201ENST00000516744 108 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 IGKV2D-23-201ENST00000518179 286 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 OR4C2P-201ENST00000530855 1064 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 MIR4715-201ENST00000584117 79 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AL136295.6-201ENST00000610486 658 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 MIR7702-201ENST00000621931 59 ntBASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.99□□□□□ -1.77
CLHC1Q8NHS4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AL031985.3-201ENST00000565390 2449 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 RNA5SP447-201ENST00000363749 119 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 RPL37P18-201ENST00000411602 243 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 VDAC1P6-201ENST00000430062 855 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 BUD31P2-201ENST00000449374 300 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 RAD23BP3-201ENST00000454157 1152 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 ANP32BP2-201ENST00000454525 545 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 NDUFA12P1-201ENST00000455914 406 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AP000873.1-201ENST00000463987 400 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 RN7SL810P-201ENST00000493031 276 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AC139783.2-201ENST00000504847 1145 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 OR5H4P-201ENST00000510851 923 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AC137768.1-201ENST00000549998 553 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 TVP23BP1-201ENST00000557500 617 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AL139254.3-201ENST00000641097 674 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 MFSD8-216ENST00000641147 4009 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 AC066616.2-201ENST00000559334 1481 ntBASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CLHC1Q8NHS4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RNF6P1-201ENST00000444889 1784 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 NOL8P1-201ENST00000508336 3529 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC092162.3-201ENST00000624511 1624 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RNU6-666P-201ENST00000363499 107 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RNU1-87P-201ENST00000363727 170 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RNA5SP167-201ENST00000365461 116 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 PGBD4P8-201ENST00000412993 562 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 ELOCP6-201ENST00000429066 328 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms