Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNA5SP73-201ENST00000516744 108 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AC010476.1-201ENST00000519111 851 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 IGHV3-32-201ENST00000519182 355 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 OR4V1P-201ENST00000525394 1140 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 TVP23BP1-201ENST00000557500 617 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 uc_338.32-201ENST00000615087 172 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AL035461.2-201ENST00000619201 524 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AP006248.2-201ENST00000623309 592 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 AL133412.1-201ENST00000380194 2992 ntBASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC50Q8IVM0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC007342.7-201ENST00000624610 2337 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 BX005019.1-201ENST00000561881 1810 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 RNA5SP447-201ENST00000363749 119 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 SEC63P1-201ENST00000425785 1258 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 ATP5HP2-201ENST00000433885 485 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 BMS1P19-201ENST00000433925 393 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 RPL35P6-201ENST00000490024 372 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC021087.2-201ENST00000504656 1203 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC021146.7-201ENST00000509604 775 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC005798.1-201ENST00000513715 387 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 RNU6-347P-201ENST00000516658 105 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AGGF1P8-201ENST00000562979 1000 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC018552.3-201ENST00000567416 561 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC079171.1-201ENST00000568788 914 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 MIR4715-201ENST00000584117 79 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC068020.1-201ENST00000594215 661 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC017076.1-201ENST00000607613 578 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 U7.8-201ENST00000619968 63 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AC244205.2-202ENST00000635781 342 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 AL139254.3-201ENST00000641097 674 ntBASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC50Q8IVM0 PNPT1P2-201ENST00000456768 2050 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 OR11H4-201ENST00000315409 1082 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 GSTA12P-201ENST00000402398 508 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 PGBD4P8-201ENST00000412993 562 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 RNF19BPX-201ENST00000426224 625 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 CBX1P1-201ENST00000440184 427 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 RNA5SP49-201ENST00000516450 115 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 HIGD1AP18-201ENST00000520730 278 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 OR7E10P-201ENST00000526420 991 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 TRAV8-5-201ENST00000537369 341 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC007424.1-203ENST00000554613 687 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC068831.4-201ENST00000556118 109 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AL451044.1-201ENST00000604867 238 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC095038.2-201ENST00000621464 1070 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC145207.9-201ENST00000623802 325 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms