Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC111000.3-201ENST00000508057 576 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AP003355.1-201ENST00000518956 587 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC105129.1-201ENST00000560250 297 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC104072.1-201ENST00000568817 668 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC008759.3-201ENST00000613300 508 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC068880.4-201ENST00000623082 495 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AC093875.1-201ENST00000623688 504 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AL596275.2-204ENST00000641628 552 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AL596275.2-206ENST00000641957 626 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AL592437.2-201ENST00000421655 2434 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 Z95327.2-201ENST00000414579 1873 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 ZFRP1-201ENST00000457579 2970 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 DHX40P1-201ENST00000588725 1412 ntBASIC4.79□□□□□ -1.64
PRPF39Q86UA1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF39Q86UA1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 RNU6-468P-201ENST00000384003 109 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 MIR195-201ENST00000385194 87 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 COX6CP17-201ENST00000421389 185 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 C4BPAP2-201ENST00000428434 478 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC023347.2-201ENST00000433994 462 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC005008.1-201ENST00000456151 612 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC022795.1-201ENST00000473808 480 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC073522.1-201ENST00000483312 377 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AK3P4-201ENST00000504283 583 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 MTATP6P22-201ENST00000507369 598 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 HPRT1P1-201ENST00000509498 657 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC008494.2-201ENST00000514544 370 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 C1GALT1P3-201ENST00000522049 819 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC068339.2-201ENST00000534395 618 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC023824.3-201ENST00000569003 562 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 MIR4789-201ENST00000577469 82 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AP000919.1-202ENST00000581139 1264 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AP006248.2-201ENST00000623309 592 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
PRPF39Q86UA1 MAPK10-303ENST00000641324 3959 ntBASIC4.78□□□□□ -1.64
PRPF39Q86UA1 AC006971.1-201ENST00000407916 4486 ntBASIC4.78□□□□□ -1.65
PRPF39Q86UA1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 SNORA62-201ENST00000365493 153 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 U6.112-201ENST00000384129 70 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AL355615.1-201ENST00000406187 641 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 RN7SKP267-201ENST00000410381 285 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC009237.10-201ENST00000414112 510 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 CENPIP1-201ENST00000425713 902 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC016712.1-201ENST00000431088 378 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF39Q86UA1 RPS26P30-201ENST00000443431 335 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC104651.2-201ENST00000447549 528 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 RPL7P31-201ENST00000450192 724 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 AC108463.1-201ENST00000450258 347 ntBASIC4.77□□□□□ -1.65
PRPF39Q86UA1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms