Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PHBP16-201ENST00000446318 950 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 RN7SL98P-201ENST00000462271 300 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC092451.1-201ENST00000480211 153 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 RN7SL810P-201ENST00000493031 276 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 MTND1P6-201ENST00000523621 946 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AL845331.3-202ENST00000562856 261 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC099489.2-201ENST00000574976 260 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 MIR4270-201ENST00000581799 70 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 AC012417.1-201ENST00000582307 1039 ntBASIC3.62□□□□□ -1.83
CCDC58Q4VC31 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC58Q4VC31 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AP001148.1-201ENST00000624124 2359 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RAD1P1-201ENST00000231383 813 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 SNORA51.1-201ENST00000363243 140 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RPL23AP59-201ENST00000399415 461 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RNA5SP36-201ENST00000410197 133 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AIMP1P1-201ENST00000418670 937 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RPS26P13-201ENST00000419030 330 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 KCTD9P3-201ENST00000434597 1169 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 MTCYBP31-201ENST00000438855 1122 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC016724.1-201ENST00000453215 421 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RPL7P32-201ENST00000457119 744 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AP000873.1-201ENST00000463987 400 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC109327.1-201ENST00000471666 403 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC011037.1-201ENST00000483964 558 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RPL35P6-201ENST00000490024 372 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RPL29P14-201ENST00000495837 428 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 HPRT1P2-201ENST00000505250 544 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 Vault.1-201ENST00000516474 102 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC022968.1-201ENST00000567372 442 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 RPL23AP87-202ENST00000573039 466 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 MIR4330-201ENST00000579077 105 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 MIR7155-201ENST00000615925 56 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC002044.3-201ENST00000623314 541 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 UBE3AP2-201ENST00000429033 2259 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 GABPAP-201ENST00000419271 1356 ntBASIC3.61□□□□□ -1.83
CCDC58Q4VC31 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC58Q4VC31 AC024560.2-201ENST00000507981 1497 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC006504.1-201ENST00000562493 3666 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 MIR124-3-201ENST00000384866 87 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 MIR1178-201ENST00000408396 91 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 MFSD13B-201ENST00000420133 1290 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 FTH1P16-201ENST00000435241 552 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 NPM1P48-201ENST00000436002 853 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 ARL2BPP10-201ENST00000446487 531 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 OR52Y1P-201ENST00000452418 828 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 RNA5SP246-201ENST00000458909 119 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC010307.1-201ENST00000467206 836 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms