Protein–RNA interactions for Protein: Q15836

VAMP3, Vesicle-associated membrane protein 3, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3Q15836 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.18□□□□□ -1.9
VAMP3Q15836 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.18□□□□□ -1.9
VAMP3Q15836 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.18□□□□□ -1.9
VAMP3Q15836 AC025554.1-201ENST00000505641 188 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 AC108064.1-201ENST00000513791 460 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 RNA5SP340-201ENST00000517132 107 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 SNORA43.3-201ENST00000517240 103 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 AC113191.1-201ENST00000517759 403 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP3Q15836 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.18□□□□□ -1.9
VAMP3Q15836 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.18□□□□□ -1.9
VAMP3Q15836 AC107958.1-201ENST00000556576 290 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.18□□□□□ -1.9
VAMP3Q15836 DPPA2P4-201ENST00000563717 878 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC3.18□□□□□ -1.9
VAMP3Q15836 AC015802.2-201ENST00000589690 189 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP3Q15836 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP3Q15836 WBP1LP12-201ENST00000604449 331 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 AC079610.2-201ENST00000604818 690 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 MIR6885-201ENST00000612241 66 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 AL049794.2-201ENST00000616301 365 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 WBP1LP8-201ENST00000617401 327 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.18□□□□□ -1.9
VAMP3Q15836 AC019206.1-201ENST00000621938 425 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 AC091905.2-201ENST00000623143 306 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.18□□□□□ -1.9
VAMP3Q15836 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC3.18□□□□□ -1.9
VAMP3Q15836 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.18□□□□□ -1.9
VAMP3Q15836 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VAMP3Q15836 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.18□□□□□ -1.9
VAMP3Q15836 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP3Q15836 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP3Q15836 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP3Q15836 AL122126.1-201ENST00000546905 1318 ntBASIC3.18□□□□□ -1.9
VAMP3Q15836 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC104966.1-201ENST00000467010 1464 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP3Q15836 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 RNU6-50P-201ENST00000362356 103 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 RNA5SP319-201ENST00000362768 119 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP3Q15836 DEFB109C-201ENST00000382575 264 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 DEFB109B-201ENST00000382656 264 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 MIR551B-201ENST00000384984 96 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 MT-TC-201ENST00000387405 66 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 HMGB1P20-201ENST00000402555 677 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 RNU2-17P-201ENST00000410290 190 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 RN7SKP106-201ENST00000410832 272 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP3Q15836 MTND4P22-201ENST00000413116 1169 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC140479.3-201ENST00000418944 1126 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.17□□□□□ -1.9
VAMP3Q15836 RPSAP32-201ENST00000432681 526 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 UBE2V1P5-201ENST00000440070 405 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 TXNP1-201ENST00000441872 371 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.17□□□□□ -1.9
VAMP3Q15836 RPS23P6-201ENST00000466136 431 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 RPL7AP6-201ENST00000477943 801 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 MTCO3P35-201ENST00000485582 781 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 LSM3P4-201ENST00000502948 309 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC098799.3-201ENST00000506095 438 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 MTND4LP22-201ENST00000508209 276 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.17□□□□□ -1.9
VAMP3Q15836 Y_RNA.667-201ENST00000516212 107 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC079600.1-201ENST00000550326 297 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 AC012414.2-201ENST00000559474 187 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.17□□□□□ -1.9
VAMP3Q15836 EIF5A2P1-201ENST00000564027 460 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP3Q15836 MTCO3P24-201ENST00000572729 782 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 RN7SL802P-201ENST00000577858 299 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP3Q15836 SNORA74C-1-201ENST00000580726 201 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC091488.1-201ENST00000604239 660 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 MIR6721-201ENST00000617181 87 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.17□□□□□ -1.9
VAMP3Q15836 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 AC099654.2-201ENST00000433031 1980 ntBASIC3.17□□□□□ -1.9
VAMP3Q15836 DLD-205ENST00000440410 1993 ntTSL 2 BASIC3.17□□□□□ -1.9
VAMP3Q15836 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VAMP3Q15836 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP3Q15836 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP3Q15836 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP3Q15836 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms