Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.12□□□□□ -1.59
COL16A1Q07092 AC079171.1-201ENST00000568788 914 ntBASIC5.12□□□□□ -1.59
COL16A1Q07092 AC016839.1-201ENST00000578162 867 ntBASIC5.12□□□□□ -1.59
COL16A1Q07092 AC006504.3-201ENST00000586818 523 ntBASIC5.12□□□□□ -1.59
COL16A1Q07092 AC023509.5-201ENST00000617434 807 ntBASIC5.12□□□□□ -1.59
COL16A1Q07092 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL16A1Q07092 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL16A1Q07092 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL16A1Q07092 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL16A1Q07092 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.11□□□□□ -1.59
COL16A1Q07092 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL16A1Q07092 BMS1P3-201ENST00000372011 932 ntBASIC5.11□□□□□ -1.59
COL16A1Q07092 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.11□□□□□ -1.59
COL16A1Q07092 AC091862.1-201ENST00000438016 1100 ntBASIC5.11□□□□□ -1.59
COL16A1Q07092 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.11□□□□□ -1.59
COL16A1Q07092 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.11□□□□□ -1.59
COL16A1Q07092 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL16A1Q07092 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.11□□□□□ -1.59
COL16A1Q07092 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.11□□□□□ -1.59
COL16A1Q07092 NCAPGP2-201ENST00000557911 754 ntBASIC5.11□□□□□ -1.59
COL16A1Q07092 AC090286.3-201ENST00000573133 187 ntBASIC5.11□□□□□ -1.59
COL16A1Q07092 MIR5186-201ENST00000577504 120 ntBASIC5.11□□□□□ -1.59
COL16A1Q07092 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.11□□□□□ -1.59
COL16A1Q07092 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL16A1Q07092 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL16A1Q07092 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL16A1Q07092 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL16A1Q07092 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL16A1Q07092 SRP72P2-201ENST00000344851 1979 ntBASIC5.11□□□□□ -1.59
COL16A1Q07092 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL16A1Q07092 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL16A1Q07092 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL16A1Q07092 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL16A1Q07092 RNA5SP80-201ENST00000410475 111 ntBASIC5.1□□□□□ -1.59
COL16A1Q07092 AC008065.1-201ENST00000428525 348 ntBASIC5.1□□□□□ -1.59
COL16A1Q07092 RPL23AP89-201ENST00000439324 255 ntBASIC5.1□□□□□ -1.59
COL16A1Q07092 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.1□□□□□ -1.59
COL16A1Q07092 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.1□□□□□ -1.59
COL16A1Q07092 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.1□□□□□ -1.59
COL16A1Q07092 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.1□□□□□ -1.59
COL16A1Q07092 AC010591.1-201ENST00000603941 649 ntBASIC5.1□□□□□ -1.59
COL16A1Q07092 AC104662.1-201ENST00000604448 511 ntBASIC5.1□□□□□ -1.59
COL16A1Q07092 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL16A1Q07092 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL16A1Q07092 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL16A1Q07092 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL16A1Q07092 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.1□□□□□ -1.59
COL16A1Q07092 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.1□□□□□ -1.59
COL16A1Q07092 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL16A1Q07092 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL16A1Q07092 RNA5SP126-201ENST00000365092 109 ntBASIC5.09□□□□□ -1.59
COL16A1Q07092 AL034403.1-201ENST00000399414 885 ntBASIC5.09□□□□□ -1.59
COL16A1Q07092 AL121878.1-201ENST00000418638 859 ntBASIC5.09□□□□□ -1.59
COL16A1Q07092 Z75741.1-201ENST00000446793 314 ntBASIC5.09□□□□□ -1.59
COL16A1Q07092 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.09□□□□□ -1.59
COL16A1Q07092 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.09□□□□□ -1.59
COL16A1Q07092 MIR5004-201ENST00000579078 107 ntBASIC5.09□□□□□ -1.59
COL16A1Q07092 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.09□□□□□ -1.59
COL16A1Q07092 AC006023.1-201ENST00000603944 259 ntBASIC5.09□□□□□ -1.59
COL16A1Q07092 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.09□□□□□ -1.59
COL16A1Q07092 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.09□□□□□ -1.59
COL16A1Q07092 MFSD8-236ENST00000641509 4050 ntBASIC5.09□□□□□ -1.59
COL16A1Q07092 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL16A1Q07092 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
COL16A1Q07092 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL16A1Q07092 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL16A1Q07092 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.09□□□□□ -1.6
COL16A1Q07092 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL16A1Q07092 VDAC1P9-201ENST00000412766 841 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL16A1Q07092 DBIP2-201ENST00000419076 262 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL16A1Q07092 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.08□□□□□ -1.6
COL16A1Q07092 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL16A1Q07092 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.08□□□□□ -1.6
COL16A1Q07092 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.08□□□□□ -1.6
COL16A1Q07092 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.08□□□□□ -1.6
COL16A1Q07092 KC877982.1-201ENST00000602313 470 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AL354760.1-201ENST00000608357 643 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AC013412.1-201ENST00000610687 192 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AL354976.1-201ENST00000613843 387 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AC138907.10-201ENST00000623708 983 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL16A1Q07092 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL16A1Q07092 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COL16A1Q07092 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL16A1Q07092 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.08□□□□□ -1.6
COL16A1Q07092 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.08□□□□□ -1.6
COL16A1Q07092 AL731532.2-201ENST00000623542 1953 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
COL16A1Q07092 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL16A1Q07092 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
COL16A1Q07092 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COL16A1Q07092 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
COL16A1Q07092 RPS26P2-201ENST00000440331 348 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AL445433.1-201ENST00000457507 257 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.08□□□□□ -1.6
COL16A1Q07092 RPL23AP65-201ENST00000475608 468 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AC108022.1-201ENST00000493466 478 ntBASIC5.08□□□□□ -1.6
COL16A1Q07092 AC093663.1-201ENST00000497190 394 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms