Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.1□□□□□ -1.59
UBE3AQ05086 AC093752.1-206ENST00000511823 336 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.1□□□□□ -1.59
UBE3AQ05086 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.1□□□□□ -1.59
UBE3AQ05086 AL049838.1-201ENST00000563647 981 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.1□□□□□ -1.59
UBE3AQ05086 AC084783.1-201ENST00000565846 910 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 SNORA74C-1-201ENST00000580726 201 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.1□□□□□ -1.59
UBE3AQ05086 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.1□□□□□ -1.59
UBE3AQ05086 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE3AQ05086 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 AC015908.5-201ENST00000623289 343 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 AC068724.3-201ENST00000625906 87 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.1□□□□□ -1.59
UBE3AQ05086 ASNSP1-204ENST00000641977 1664 ntBASIC5.1□□□□□ -1.59
UBE3AQ05086 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBE3AQ05086 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
UBE3AQ05086 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.09□□□□□ -1.59
UBE3AQ05086 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.09□□□□□ -1.59
UBE3AQ05086 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.09□□□□□ -1.59
UBE3AQ05086 AL450326.2-201ENST00000421913 1962 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 AC111188.2-201ENST00000529697 1387 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
UBE3AQ05086 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 Y_RNA.578-201ENST00000390903 88 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 PCNPP4-201ENST00000414817 517 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.09□□□□□ -1.59
UBE3AQ05086 RPEP3-201ENST00000425462 676 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.09□□□□□ -1.59
UBE3AQ05086 RPS17P8-201ENST00000434525 335 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.09□□□□□ -1.59
UBE3AQ05086 MTND1P33-201ENST00000446251 917 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.09□□□□□ -1.59
UBE3AQ05086 AC091868.1-201ENST00000508746 304 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.09□□□□□ -1.59
UBE3AQ05086 AC015795.1-201ENST00000513669 327 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AP001207.2-201ENST00000519490 539 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.09□□□□□ -1.59
UBE3AQ05086 AC107918.3-201ENST00000533272 382 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.09□□□□□ -1.59
UBE3AQ05086 AL442163.2-201ENST00000553912 710 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 NIFKP8-201ENST00000560500 874 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AC116553.2-201ENST00000564203 463 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 MIR4760-201ENST00000585040 80 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.09□□□□□ -1.59
UBE3AQ05086 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.09□□□□□ -1.59
UBE3AQ05086 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 AC123768.4-201ENST00000616244 701 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AL022401.1-201ENST00000619498 108 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 AC104985.3-201ENST00000623479 597 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBE3AQ05086 AL451142.2-201ENST00000429076 2090 ntBASIC5.09□□□□□ -1.59
UBE3AQ05086 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
UBE3AQ05086 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
UBE3AQ05086 TLK1P1-201ENST00000456760 2440 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBE3AQ05086 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
UBE3AQ05086 AC004817.4-201ENST00000602396 3625 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AL049737.1-201ENST00000413920 1403 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UBE3AQ05086 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBE3AQ05086 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBE3AQ05086 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.08□□□□□ -1.6
UBE3AQ05086 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.08□□□□□ -1.6
UBE3AQ05086 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
UBE3AQ05086 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBE3AQ05086 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UBE3AQ05086 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBE3AQ05086 VDAC2P1-201ENST00000399358 958 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 MIR1193-201ENST00000408109 78 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 U3.32-201ENST00000408116 212 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.08□□□□□ -1.6
UBE3AQ05086 AL449283.1-202ENST00000418249 604 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AC140479.3-201ENST00000418944 1126 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AL645608.4-201ENST00000423619 154 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.08□□□□□ -1.6
UBE3AQ05086 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBE3AQ05086 RRM2P4-201ENST00000441721 562 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.08□□□□□ -1.6
UBE3AQ05086 AL591623.2-201ENST00000449978 222 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 CCDC75P1-201ENST00000469247 791 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AC010618.1-201ENST00000469924 477 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.08□□□□□ -1.6
UBE3AQ05086 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.08□□□□□ -1.6
UBE3AQ05086 RN7SL558P-201ENST00000497468 299 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AC025674.1-201ENST00000507074 324 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.08□□□□□ -1.6
UBE3AQ05086 AC008494.2-201ENST00000514544 370 ntBASIC5.08□□□□□ -1.6
UBE3AQ05086 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.08□□□□□ -1.6
UBE3AQ05086 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms