Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 uc_338.32-201ENST00000615087 172 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC016957.2-201ENST00000616998 848 ntBASIC3.06□□□□□ -1.92
CCL20P78556 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.06□□□□□ -1.92
CCL20P78556 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCL20P78556 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CCL20P78556 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.05□□□□□ -1.92
CCL20P78556 AC099535.1-201ENST00000408928 371 ntBASIC3.05□□□□□ -1.92
CCL20P78556 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 RPL7AP73-201ENST00000413490 353 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL20P78556 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 AL159169.1-201ENST00000421119 127 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC006065.1-201ENST00000422539 802 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC009965.2-201ENST00000425328 970 ntBASIC3.05□□□□□ -1.92
CCL20P78556 OR5AW1P-201ENST00000426334 1006 ntBASIC3.05□□□□□ -1.92
CCL20P78556 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL20P78556 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL20P78556 AC083863.1-201ENST00000438811 231 ntBASIC3.05□□□□□ -1.92
CCL20P78556 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 RANP8-201ENST00000444720 713 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL20P78556 PHBP16-201ENST00000446318 950 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL20P78556 NANOGP10-201ENST00000453325 895 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC092691.2-201ENST00000461787 803 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC007537.2-201ENST00000472093 511 ntBASIC3.05□□□□□ -1.92
CCL20P78556 RPS3AP50-201ENST00000487064 803 ntBASIC3.05□□□□□ -1.92
CCL20P78556 RN7SL691P-201ENST00000494487 301 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC068305.1-201ENST00000497406 726 ntBASIC3.05□□□□□ -1.92
CCL20P78556 RN7SKP209-201ENST00000516888 304 ntBASIC3.05□□□□□ -1.92
CCL20P78556 IGHV3-32-201ENST00000519182 355 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.05□□□□□ -1.92
CCL20P78556 TRAV8-5-201ENST00000537369 341 ntBASIC3.05□□□□□ -1.92
CCL20P78556 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL20P78556 AC084783.1-201ENST00000565846 910 ntBASIC3.05□□□□□ -1.92
CCL20P78556 UBE2FP2-201ENST00000566646 462 ntBASIC3.05□□□□□ -1.92
CCL20P78556 MIR3186-201ENST00000577404 85 ntBASIC3.05□□□□□ -1.92
CCL20P78556 MIR744-201ENST00000578242 98 ntBASIC3.05□□□□□ -1.92
CCL20P78556 MIR4737-201ENST00000583979 81 ntBASIC3.05□□□□□ -1.92
CCL20P78556 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 AC008782.1-201ENST00000603386 430 ntBASIC3.05□□□□□ -1.92
CCL20P78556 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 MIR6778-201ENST00000617912 73 ntBASIC3.05□□□□□ -1.92
CCL20P78556 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 AC022893.2-201ENST00000564832 3296 ntBASIC3.05□□□□□ -1.92
CCL20P78556 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL20P78556 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL20P78556 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL20P78556 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCL20P78556 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL20P78556 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL20P78556 MFSD8-220ENST00000641243 1422 ntBASIC3.04□□□□□ -1.92
CCL20P78556 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.04□□□□□ -1.92
CCL20P78556 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL20P78556 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCL20P78556 AC240504.1-201ENST00000395709 845 ntBASIC3.04□□□□□ -1.92
CCL20P78556 AL645927.1-201ENST00000396783 406 ntBASIC3.04□□□□□ -1.92
CCL20P78556 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CCL20P78556 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL20P78556 HMGB3P19-201ENST00000403971 560 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RN7SKP229-201ENST00000410465 302 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RN7SKP213-201ENST00000410746 298 ntBASIC3.04□□□□□ -1.92
CCL20P78556 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.04□□□□□ -1.92
CCL20P78556 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL20P78556 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCL20P78556 P2RY10P2-201ENST00000416730 913 ntBASIC3.04□□□□□ -1.92
CCL20P78556 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL20P78556 CEACAMP7-201ENST00000444105 496 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.04□□□□□ -1.92
CCL20P78556 CCRL1P1-201ENST00000449542 1053 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RN7SL329P-201ENST00000467740 299 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RPL7P1-201ENST00000468161 747 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RPL7P9-201ENST00000468715 747 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RPSAP50-201ENST00000481955 852 ntBASIC3.04□□□□□ -1.92
CCL20P78556 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.04□□□□□ -1.92
CCL20P78556 AC092045.1-201ENST00000495716 1231 ntBASIC3.04□□□□□ -1.92
CCL20P78556 AC090568.1-201ENST00000509499 856 ntBASIC3.04□□□□□ -1.92
CCL20P78556 ARL2BPP6-201ENST00000512757 439 ntBASIC3.04□□□□□ -1.92
CCL20P78556 RN7SKP60-201ENST00000516985 239 ntBASIC3.04□□□□□ -1.92
CCL20P78556 AL139174.1-201ENST00000531489 886 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms