Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC073508.1-201ENST00000428866 656 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AC010095.1-201ENST00000443543 144 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKDCP78527 RN7SL432P-201ENST00000484057 298 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.68□□□□□ -1.98
PRKDCP78527 RAC1P2-201ENST00000511164 579 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 SNORA70.18-201ENST00000516696 98 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 snoU109.6-201ENST00000516831 118 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.68□□□□□ -1.98
PRKDCP78527 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 AC123769.2-201ENST00000624332 5984 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
PRKDCP78527 AC003985.2-201ENST00000562268 1669 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 RNA5SP50-201ENST00000363731 107 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKDCP78527 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.68□□□□□ -1.98
PRKDCP78527 CCDC75P1-201ENST00000469247 791 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AP000916.1-201ENST00000533869 835 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AC010591.1-201ENST00000603941 649 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AC009464.1-201ENST00000615731 469 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AC019278.1-201ENST00000623516 479 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AC026422.1-201ENST00000623961 452 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PRKDCP78527 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 GTF3AP5-201ENST00000442645 697 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.67□□□□□ -1.98
PRKDCP78527 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 FAM172BP-201ENST00000487497 1089 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.67□□□□□ -1.98
PRKDCP78527 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC2.67□□□□□ -1.98
PRKDCP78527 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.67□□□□□ -1.98
PRKDCP78527 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.67□□□□□ -1.98
PRKDCP78527 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC2.67□□□□□ -1.98
PRKDCP78527 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
PRKDCP78527 AL136360.1-201ENST00000503377 1900 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 REREP1Y-201ENST00000422655 198 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 REREP2Y-201ENST00000439103 200 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 HMGB1P37-201ENST00000439613 609 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.67□□□□□ -1.98
PRKDCP78527 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.67□□□□□ -1.98
PRKDCP78527 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 ASNSP3-201ENST00000451989 1306 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 MIR199A2-201ENST00000385289 110 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 VDAC1P9-201ENST00000412766 841 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 NPM1P13-201ENST00000452663 865 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 OR5M7P-201ENST00000526140 972 ntBASIC2.67□□□□□ -1.98
PRKDCP78527 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.67□□□□□ -1.98
PRKDCP78527 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKDCP78527 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.67□□□□□ -1.98
PRKDCP78527 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PRKDCP78527 USP8P1-201ENST00000494673 3183 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PRKDCP78527 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKDCP78527 AC005002.1-201ENST00000447458 540 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKDCP78527 AL451044.1-201ENST00000604867 238 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKDCP78527 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 AC021755.1-201ENST00000559747 1447 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKDCP78527 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PRKDCP78527 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKDCP78527 ATP5HP2-201ENST00000433885 485 ntBASIC2.66□□□□□ -1.98
PRKDCP78527 SETD6P1-201ENST00000444575 317 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms