Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TPM4P67936 CASC19-284ENST00000642142 1868 ntBASIC4.41□□□□□ -1.7
TPM4P67936 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.4□□□□□ -1.7
TPM4P67936 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TPM4P67936 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
TPM4P67936 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TPM4P67936 AL133412.1-201ENST00000380194 2992 ntBASIC4.4□□□□□ -1.7
TPM4P67936 ATP5F1P4-201ENST00000397288 746 ntBASIC4.4□□□□□ -1.71
TPM4P67936 RPL37P18-201ENST00000411602 243 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC011933.1-201ENST00000413334 321 ntBASIC4.4□□□□□ -1.71
TPM4P67936 RPL30P2-201ENST00000414021 291 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC069213.2-201ENST00000420238 366 ntBASIC4.4□□□□□ -1.71
TPM4P67936 OR5BE1P-201ENST00000425977 939 ntBASIC4.4□□□□□ -1.71
TPM4P67936 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM4P67936 snoU13.1-201ENST00000459157 104 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC116533.1-201ENST00000459748 321 ntBASIC4.4□□□□□ -1.71
TPM4P67936 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.4□□□□□ -1.71
TPM4P67936 RN7SL481P-201ENST00000477764 299 ntBASIC4.4□□□□□ -1.71
TPM4P67936 RPS4XP14-201ENST00000493072 781 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC111000.3-201ENST00000508057 576 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM4P67936 NPM1P52-201ENST00000518264 846 ntBASIC4.4□□□□□ -1.71
TPM4P67936 OR8G5-201ENST00000524943 1041 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM4P67936 CBX3P5-201ENST00000552017 521 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM4P67936 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.4□□□□□ -1.71
TPM4P67936 MIR4480-201ENST00000582492 71 ntBASIC4.4□□□□□ -1.71
TPM4P67936 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.4□□□□□ -1.71
TPM4P67936 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.4□□□□□ -1.71
TPM4P67936 AL133247.2-201ENST00000603236 482 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC020910.2-201ENST00000603635 610 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.4□□□□□ -1.71
TPM4P67936 MIR6862-1-201ENST00000613016 70 ntBASIC4.4□□□□□ -1.71
TPM4P67936 MIR6862-2-201ENST00000614755 70 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.4□□□□□ -1.71
TPM4P67936 OR5BE1P-202ENST00000641168 1176 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC095050.2-201ENST00000510748 1458 ntBASIC4.4□□□□□ -1.71
TPM4P67936 TNPO1P3-201ENST00000436471 2662 ntBASIC4.4□□□□□ -1.71
TPM4P67936 AC007342.7-201ENST00000624610 2337 ntBASIC4.4□□□□□ -1.71
TPM4P67936 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
TPM4P67936 PRO1804-201ENST00000623780 2050 ntBASIC4.39□□□□□ -1.71
TPM4P67936 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.39□□□□□ -1.71
TPM4P67936 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TPM4P67936 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TPM4P67936 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TPM4P67936 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.39□□□□□ -1.71
TPM4P67936 MIR550A3-201ENST00000390735 95 ntBASIC4.39□□□□□ -1.71
TPM4P67936 HSPE1P12-201ENST00000412576 301 ntBASIC4.39□□□□□ -1.71
TPM4P67936 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TPM4P67936 OR5AW1P-201ENST00000426334 1006 ntBASIC4.39□□□□□ -1.71
TPM4P67936 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.39□□□□□ -1.71
TPM4P67936 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.39□□□□□ -1.71
TPM4P67936 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
TPM4P67936 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 Z95152.1-201ENST00000453556 656 ntBASIC4.39□□□□□ -1.71
TPM4P67936 RPS23P1-201ENST00000491662 432 ntBASIC4.39□□□□□ -1.71
TPM4P67936 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 HAUS1P1-201ENST00000505275 832 ntBASIC4.39□□□□□ -1.71
TPM4P67936 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.39□□□□□ -1.71
TPM4P67936 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.39□□□□□ -1.71
TPM4P67936 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 AC099489.2-201ENST00000574976 260 ntBASIC4.39□□□□□ -1.71
TPM4P67936 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM4P67936 MIR4716-201ENST00000579628 84 ntBASIC4.39□□□□□ -1.71
TPM4P67936 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.39□□□□□ -1.71
TPM4P67936 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.39□□□□□ -1.71
TPM4P67936 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.39□□□□□ -1.71
TPM4P67936 ATE1-AS1-202ENST00000636460 506 ntBASIC4.39□□□□□ -1.71
TPM4P67936 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.39□□□□□ -1.71
TPM4P67936 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.39□□□□□ -1.71
TPM4P67936 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TPM4P67936 AL356317.1-201ENST00000396110 1436 ntBASIC4.38□□□□□ -1.71
TPM4P67936 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.38□□□□□ -1.71
TPM4P67936 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TPM4P67936 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 AC079741.1-201ENST00000321498 212 ntBASIC4.38□□□□□ -1.71
TPM4P67936 RN7SKP44-201ENST00000363602 316 ntBASIC4.38□□□□□ -1.71
TPM4P67936 RNU6-225P-201ENST00000384613 103 ntBASIC4.38□□□□□ -1.71
TPM4P67936 BTF3P10-201ENST00000433415 495 ntBASIC4.38□□□□□ -1.71
TPM4P67936 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.38□□□□□ -1.71
TPM4P67936 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TPM4P67936 AC114982.2-201ENST00000461396 358 ntBASIC4.38□□□□□ -1.71
TPM4P67936 RN7SL860P-201ENST00000473738 223 ntBASIC4.38□□□□□ -1.71
TPM4P67936 S100A11P1-201ENST00000477525 312 ntBASIC4.38□□□□□ -1.71
TPM4P67936 RN7SL826P-201ENST00000479724 288 ntBASIC4.38□□□□□ -1.71
TPM4P67936 RN7SKP83-201ENST00000516512 178 ntBASIC4.38□□□□□ -1.71
TPM4P67936 RNU6-1231P-201ENST00000517185 103 ntBASIC4.38□□□□□ -1.71
TPM4P67936 SMARCE1P4-201ENST00000523647 241 ntBASIC4.38□□□□□ -1.71
TPM4P67936 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 OR5AN2P-201ENST00000534535 896 ntBASIC4.38□□□□□ -1.71
TPM4P67936 AC007424.1-203ENST00000554613 687 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms