Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 AC090424.1-201ENST00000535243 736 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.64□□□□□ -1.51
YBX1P67809 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.64□□□□□ -1.51
YBX1P67809 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.64□□□□□ -1.51
YBX1P67809 AP000942.4-201ENST00000604811 241 ntBASIC5.64□□□□□ -1.51
YBX1P67809 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AC092650.2-201ENST00000619984 902 ntBASIC5.64□□□□□ -1.51
YBX1P67809 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
YBX1P67809 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.64□□□□□ -1.51
YBX1P67809 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
YBX1P67809 CDC27P2-201ENST00000425026 1922 ntBASIC5.64□□□□□ -1.51
YBX1P67809 AP004607.3-201ENST00000530354 3915 ntBASIC5.64□□□□□ -1.51
YBX1P67809 MFSD8-239ENST00000641590 2479 ntBASIC5.64□□□□□ -1.51
YBX1P67809 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 AC114774.1-201ENST00000507410 1770 ntBASIC5.63□□□□□ -1.51
YBX1P67809 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 RNU6-877P-201ENST00000383868 107 ntBASIC5.63□□□□□ -1.51
YBX1P67809 RNU6-723P-201ENST00000383973 107 ntBASIC5.63□□□□□ -1.51
YBX1P67809 Y_RNA.548-201ENST00000384656 105 ntBASIC5.63□□□□□ -1.51
YBX1P67809 RNU11-201ENST00000387069 134 ntBASIC5.63□□□□□ -1.51
YBX1P67809 RPS3AP36-201ENST00000398190 775 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC025750.1-201ENST00000399891 379 ntBASIC5.63□□□□□ -1.51
YBX1P67809 OR7E101P-201ENST00000400428 513 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL590004.1-201ENST00000405321 300 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC016739.1-201ENST00000405359 345 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL356776.1-201ENST00000406574 447 ntBASIC5.63□□□□□ -1.51
YBX1P67809 Y_RNA.598-201ENST00000410480 95 ntBASIC5.63□□□□□ -1.51
YBX1P67809 RN7SKP17-201ENST00000411242 351 ntBASIC5.63□□□□□ -1.51
YBX1P67809 HMGB1P11-201ENST00000413899 637 ntBASIC5.63□□□□□ -1.51
YBX1P67809 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 C1DP2-201ENST00000418167 426 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 RPS3P2-201ENST00000421346 701 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.63□□□□□ -1.51
YBX1P67809 CHEK2P5-201ENST00000423877 246 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL009174.1-201ENST00000426577 416 ntBASIC5.63□□□□□ -1.51
YBX1P67809 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 AC007559.1-201ENST00000428736 355 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 AC126120.1-201ENST00000431082 470 ntBASIC5.63□□□□□ -1.51
YBX1P67809 RPL7P29-201ENST00000437151 728 ntBASIC5.63□□□□□ -1.51
YBX1P67809 TUBB4BP6-201ENST00000437576 479 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 AC023141.8-201ENST00000442554 208 ntBASIC5.63□□□□□ -1.51
YBX1P67809 USP9YP12-201ENST00000450481 570 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 ACA64.1-201ENST00000459171 127 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL122020.1-201ENST00000472287 459 ntBASIC5.63□□□□□ -1.51
YBX1P67809 RPS3AP14-201ENST00000483907 780 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 AC105914.1-201ENST00000511798 226 ntBASIC5.63□□□□□ -1.51
YBX1P67809 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.63□□□□□ -1.51
YBX1P67809 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 RNA5SP271-201ENST00000516700 88 ntBASIC5.63□□□□□ -1.51
YBX1P67809 Y_RNA.704-201ENST00000516851 102 ntBASIC5.63□□□□□ -1.51
YBX1P67809 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.63□□□□□ -1.51
YBX1P67809 MIR3614-201ENST00000581261 86 ntBASIC5.63□□□□□ -1.51
YBX1P67809 FAM106CP-201ENST00000582212 507 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.63□□□□□ -1.51
YBX1P67809 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
YBX1P67809 AL360012.1-201ENST00000602813 131 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AL596327.1-201ENST00000603629 213 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC010200.2-201ENST00000605098 235 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC135507.2-201ENST00000612443 309 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AC005332.6-201ENST00000613178 446 ntBASIC5.63□□□□□ -1.51
YBX1P67809 AP001506.1-201ENST00000615444 211 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms