Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CYP4A43P-201ENST00000568156 121 ntBASIC3.15□□□□□ -1.91
CMC4P56277 HNRNPCP4-201ENST00000571636 900 ntBASIC3.15□□□□□ -1.91
CMC4P56277 MTND6P33-201ENST00000571794 183 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.15□□□□□ -1.91
CMC4P56277 BX322635.1-201ENST00000605804 496 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AC026979.4-201ENST00000606555 645 ntBASIC3.15□□□□□ -1.91
CMC4P56277 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.15□□□□□ -1.91
CMC4P56277 AC015802.5-201ENST00000607478 399 ntBASIC3.15□□□□□ -1.91
CMC4P56277 AC055764.2-201ENST00000610089 670 ntBASIC3.15□□□□□ -1.91
CMC4P56277 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CMC4P56277 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.15□□□□□ -1.91
CMC4P56277 AP000843.1-201ENST00000624880 701 ntBASIC3.15□□□□□ -1.91
CMC4P56277 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CMC4P56277 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CMC4P56277 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.15□□□□□ -1.91
CMC4P56277 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.91
CMC4P56277 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CMC4P56277 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 SNORA70C-201ENST00000384538 135 ntBASIC3.14□□□□□ -1.91
CMC4P56277 MIR141-201ENST00000384975 95 ntBASIC3.14□□□□□ -1.91
CMC4P56277 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CMC4P56277 ENSAP1-201ENST00000392855 326 ntBASIC3.14□□□□□ -1.91
CMC4P56277 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 RPL31P52-201ENST00000407532 367 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AL139095.3-201ENST00000419672 1203 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.14□□□□□ -1.91
CMC4P56277 AC073464.3-201ENST00000422564 712 ntBASIC3.14□□□□□ -1.91
CMC4P56277 SEC63P1-201ENST00000425785 1258 ntBASIC3.14□□□□□ -1.91
CMC4P56277 C4BPAP2-201ENST00000428434 478 ntBASIC3.14□□□□□ -1.91
CMC4P56277 COX6B1P7-201ENST00000430845 235 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC016712.1-201ENST00000431088 378 ntBASIC3.14□□□□□ -1.91
CMC4P56277 TRIM60P13-201ENST00000432350 1283 ntBASIC3.14□□□□□ -1.91
CMC4P56277 BTF3P10-201ENST00000433415 495 ntBASIC3.14□□□□□ -1.91
CMC4P56277 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.14□□□□□ -1.91
CMC4P56277 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.14□□□□□ -1.91
CMC4P56277 MED6P1-201ENST00000439659 713 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 RNA5SP246-201ENST00000458909 119 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC010618.1-201ENST00000469924 477 ntBASIC3.14□□□□□ -1.91
CMC4P56277 RN7SL585P-201ENST00000470538 280 ntBASIC3.14□□□□□ -1.91
CMC4P56277 MTND6P6-201ENST00000478031 263 ntBASIC3.14□□□□□ -1.91
CMC4P56277 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.14□□□□□ -1.91
CMC4P56277 RPL29P14-201ENST00000495837 428 ntBASIC3.14□□□□□ -1.91
CMC4P56277 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 ARL4AP1-201ENST00000503220 705 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC025459.1-201ENST00000504072 156 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 AC092593.2-201ENST00000513866 913 ntBASIC3.14□□□□□ -1.91
CMC4P56277 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.14□□□□□ -1.91
CMC4P56277 SNORA31.9-201ENST00000516429 84 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 AC134698.5-201ENST00000519444 336 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.14□□□□□ -1.91
CMC4P56277 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.14□□□□□ -1.91
CMC4P56277 PDCD5P1-201ENST00000543528 309 ntBASIC3.14□□□□□ -1.91
CMC4P56277 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.14□□□□□ -1.91
CMC4P56277 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 AC233702.9-201ENST00000581528 203 ntBASIC3.14□□□□□ -1.91
CMC4P56277 MIR548Y-201ENST00000582739 110 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.14□□□□□ -1.91
CMC4P56277 VN1R84P-201ENST00000593697 235 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.14□□□□□ -1.91
CMC4P56277 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.14□□□□□ -1.91
CMC4P56277 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.14□□□□□ -1.91
CMC4P56277 CR589904.2-201ENST00000612533 440 ntBASIC3.14□□□□□ -1.91
CMC4P56277 AC010608.2-201ENST00000624830 470 ntBASIC3.14□□□□□ -1.91
CMC4P56277 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CMC4P56277 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CMC4P56277 AC006042.3-201ENST00000454684 1469 ntBASIC3.14□□□□□ -1.91
CMC4P56277 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CMC4P56277 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.14□□□□□ -1.91
CMC4P56277 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.14□□□□□ -1.91
CMC4P56277 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.14□□□□□ -1.91
CMC4P56277 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CMC4P56277 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.13□□□□□ -1.91
CMC4P56277 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 Z73965.1-201ENST00000623412 2297 ntBASIC3.13□□□□□ -1.91
CMC4P56277 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 AC011266.1-201ENST00000624119 3569 ntBASIC3.13□□□□□ -1.91
CMC4P56277 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMC4P56277 CCNB2P1-201ENST00000399411 1150 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms