Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 AL160275.2-201ENST00000412010 394 ntBASIC4.26□□□□□ -1.73
CDH6P55285 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH6P55285 RPL23AP38-201ENST00000423801 469 ntBASIC4.26□□□□□ -1.73
CDH6P55285 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 VDAC1P6-201ENST00000430062 855 ntBASIC4.26□□□□□ -1.73
CDH6P55285 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH6P55285 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH6P55285 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 AC105137.1-201ENST00000484355 562 ntBASIC4.26□□□□□ -1.73
CDH6P55285 AC005912.1-201ENST00000495392 255 ntBASIC4.26□□□□□ -1.73
CDH6P55285 RPL29P14-201ENST00000495837 428 ntBASIC4.26□□□□□ -1.73
CDH6P55285 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 IGKV2-38-201ENST00000517443 247 ntBASIC4.26□□□□□ -1.73
CDH6P55285 MYL12AP1-201ENST00000518490 515 ntBASIC4.26□□□□□ -1.73
CDH6P55285 SMARCE1P4-201ENST00000523647 241 ntBASIC4.26□□□□□ -1.73
CDH6P55285 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH6P55285 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH6P55285 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 AC008638.3-201ENST00000603341 463 ntBASIC4.26□□□□□ -1.73
CDH6P55285 AC104662.1-201ENST00000604448 511 ntBASIC4.26□□□□□ -1.73
CDH6P55285 ARF4P1-201ENST00000605447 541 ntBASIC4.26□□□□□ -1.73
CDH6P55285 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
CDH6P55285 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH6P55285 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 AC005261.4-201ENST00000600047 1385 ntBASIC4.26□□□□□ -1.73
CDH6P55285 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH6P55285 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH6P55285 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH6P55285 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH6P55285 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 SNORD35B-201ENST00000363660 87 ntBASIC4.25□□□□□ -1.73
CDH6P55285 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 MIR92A2-201ENST00000385299 75 ntBASIC4.25□□□□□ -1.73
CDH6P55285 GSTA12P-201ENST00000402398 508 ntBASIC4.25□□□□□ -1.73
CDH6P55285 RNA5SP104-201ENST00000410989 118 ntBASIC4.25□□□□□ -1.73
CDH6P55285 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH6P55285 AL358472.1-201ENST00000431295 329 ntBASIC4.25□□□□□ -1.73
CDH6P55285 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 AC069285.2-201ENST00000440210 275 ntBASIC4.25□□□□□ -1.73
CDH6P55285 RPL7P1-201ENST00000468161 747 ntBASIC4.25□□□□□ -1.73
CDH6P55285 RPL7P9-201ENST00000468715 747 ntBASIC4.25□□□□□ -1.73
CDH6P55285 S100A11P1-201ENST00000477525 312 ntBASIC4.25□□□□□ -1.73
CDH6P55285 AC025445.1-201ENST00000502728 300 ntBASIC4.25□□□□□ -1.73
CDH6P55285 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH6P55285 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 AC021146.7-201ENST00000509604 775 ntBASIC4.25□□□□□ -1.73
CDH6P55285 ACTR6P1-201ENST00000514311 1104 ntBASIC4.25□□□□□ -1.73
CDH6P55285 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 AP003730.1-201ENST00000524605 285 ntBASIC4.25□□□□□ -1.73
CDH6P55285 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.25□□□□□ -1.73
CDH6P55285 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH6P55285 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH6P55285 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 AC114878.2-201ENST00000604863 1251 ntBASIC4.25□□□□□ -1.73
CDH6P55285 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 AL445423.1-201ENST00000609941 536 ntBASIC4.25□□□□□ -1.73
CDH6P55285 AC078899.5-201ENST00000612475 178 ntBASIC4.25□□□□□ -1.73
CDH6P55285 MLECP1-201ENST00000615893 709 ntBASIC4.25□□□□□ -1.73
CDH6P55285 AL445567.2-201ENST00000618935 498 ntBASIC4.25□□□□□ -1.73
CDH6P55285 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH6P55285 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH6P55285 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH6P55285 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH6P55285 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH6P55285 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH6P55285 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH6P55285 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms