Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RPL23AP89-201ENST00000439324 255 ntBASIC4.29□□□□□ -1.72
CDH4P55283 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH4P55283 MTND6P6-201ENST00000478031 263 ntBASIC4.29□□□□□ -1.72
CDH4P55283 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH4P55283 IGBP1P5-201ENST00000507524 1000 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH4P55283 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH4P55283 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH4P55283 AC063950.1-201ENST00000552036 308 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AC022655.2-201ENST00000577280 318 ntBASIC4.29□□□□□ -1.72
CDH4P55283 RN7SL600P-201ENST00000581811 299 ntBASIC4.29□□□□□ -1.72
CDH4P55283 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH4P55283 AC092653.1-201ENST00000608509 531 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH4P55283 AC026368.1-201ENST00000614934 690 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AC010608.2-201ENST00000624830 470 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH4P55283 AC119674.1-220ENST00000641502 1048 ntBASIC4.29□□□□□ -1.72
CDH4P55283 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CDH4P55283 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH4P55283 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDH4P55283 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH4P55283 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH4P55283 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH4P55283 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CDH4P55283 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH4P55283 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CDH4P55283 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH4P55283 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CDH4P55283 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDH4P55283 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDH4P55283 RNA5SP146-201ENST00000410743 123 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH4P55283 OR2X1P-201ENST00000421144 687 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH4P55283 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH4P55283 AC114755.5-201ENST00000447760 831 ntBASIC4.28□□□□□ -1.72
CDH4P55283 MORF4L1P4-201ENST00000450245 976 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AC239809.1-201ENST00000450470 217 ntBASIC4.28□□□□□ -1.72
CDH4P55283 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH4P55283 IFNWP4-201ENST00000453148 294 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AP002345.1-201ENST00000456493 928 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH4P55283 RPS7P7-201ENST00000463499 571 ntBASIC4.28□□□□□ -1.72
CDH4P55283 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CDH4P55283 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH4P55283 HMGB1P47-201ENST00000511281 589 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AC090281.1-201ENST00000523019 276 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH4P55283 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH4P55283 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH4P55283 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH4P55283 AC073111.2-201ENST00000605657 1075 ntBASIC4.28□□□□□ -1.72
CDH4P55283 MIR7702-201ENST00000621931 59 ntBASIC4.28□□□□□ -1.72
CDH4P55283 AC016717.3-201ENST00000624730 554 ntBASIC4.28□□□□□ -1.72
CDH4P55283 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH4P55283 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH4P55283 USP9YP4-201ENST00000424401 1745 ntBASIC4.28□□□□□ -1.72
CDH4P55283 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.28□□□□□ -1.72
CDH4P55283 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH4P55283 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH4P55283 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.73
CDH4P55283 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH4P55283 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CDH4P55283 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH4P55283 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH4P55283 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH4P55283 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH4P55283 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH4P55283 RNA5SP498-201ENST00000411342 120 ntBASIC4.27□□□□□ -1.73
CDH4P55283 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 SEC63P1-201ENST00000425785 1258 ntBASIC4.27□□□□□ -1.73
CDH4P55283 NPM1P24-201ENST00000428039 894 ntBASIC4.27□□□□□ -1.73
CDH4P55283 RPS27AP12-201ENST00000429552 465 ntBASIC4.27□□□□□ -1.73
CDH4P55283 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH4P55283 RPS26P28-201ENST00000470806 348 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC103987.1-201ENST00000473394 348 ntBASIC4.27□□□□□ -1.73
CDH4P55283 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH4P55283 RN7SL604P-201ENST00000492589 296 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 AC016550.3-201ENST00000515706 767 ntBASIC4.27□□□□□ -1.73
CDH4P55283 RNU6-551P-201ENST00000516661 103 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 IGLV3-26-201ENST00000520756 302 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH4P55283 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH4P55283 AL049844.2-201ENST00000604280 628 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AL591034.3-201ENST00000605511 685 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH4P55283 AC017076.1-201ENST00000607613 578 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC084036.1-201ENST00000609190 508 ntBASIC4.27□□□□□ -1.73
CDH4P55283 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms