Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.69□□□□□ -1.66
LIMK1P53667 NUTF2P3-201ENST00000448540 384 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.69□□□□□ -1.66
LIMK1P53667 SETP6-201ENST00000479329 568 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC090686.1-201ENST00000481577 749 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 RPL21P47-201ENST00000483696 477 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC092902.1-201ENST00000486999 259 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC104629.1-201ENST00000494226 508 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 HMGB3P13-201ENST00000511263 607 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 RNU1-6P-201ENST00000516290 144 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 MRPL49P2-201ENST00000521066 465 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 MTCO1P49-201ENST00000523429 802 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 OR5AK3P-201ENST00000527486 1297 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 MIR4444-1-201ENST00000581696 74 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 MIR4444-2-201ENST00000584390 74 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC012254.4-201ENST00000588843 273 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC018926.1-201ENST00000616335 435 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC006133.1-201ENST00000617106 264 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 RNA5SP196-201ENST00000625967 102 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.69□□□□□ -1.66
LIMK1P53667 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.69□□□□□ -1.66
LIMK1P53667 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
LIMK1P53667 AC010300.1-201ENST00000600671 5134 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 MTCO1P4-201ENST00000520516 1409 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 AL133243.3-201ENST00000617415 3004 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 AL136520.1-201ENST00000600311 1322 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC008432.1-201ENST00000615912 1320 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LIMK1P53667 AC092162.3-201ENST00000624511 1624 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIMK1P53667 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 AC025125.1-201ENST00000624743 1922 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AL353743.4-201ENST00000422653 1547 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIMK1P53667 DHX9P1-201ENST00000436565 3076 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 RN7SKP44-201ENST00000363602 316 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIMK1P53667 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AL390316.1-201ENST00000406279 553 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 RN7SKP267-201ENST00000410381 285 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 RNA5SP345-201ENST00000410646 108 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 TBCAP2-201ENST00000416175 326 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 AL356387.2-201ENST00000422272 243 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
LIMK1P53667 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.68□□□□□ -1.66
LIMK1P53667 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 MED6P1-201ENST00000439659 713 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LIMK1P53667 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 MTND2P8-201ENST00000450555 1025 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.68□□□□□ -1.66
LIMK1P53667 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 RPL32P14-201ENST00000463196 378 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 CYCSP20-201ENST00000473154 315 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AC015908.1-201ENST00000478739 476 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LIMK1P53667 SNORA67.7-201ENST00000516664 135 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 RN7SKP82-201ENST00000516786 223 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.68□□□□□ -1.66
LIMK1P53667 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 C1DP5-201ENST00000525775 383 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 OR4A2P-201ENST00000527276 913 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.68□□□□□ -1.66
LIMK1P53667 AP002812.4-201ENST00000532139 286 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 AC104229.1-201ENST00000561364 255 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AGGF1P9-201ENST00000561884 913 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.68□□□□□ -1.66
LIMK1P53667 RN7SL802P-201ENST00000577858 299 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 AC012409.3-201ENST00000611343 981 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AC114781.5-201ENST00000615297 108 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AL049794.2-201ENST00000616301 365 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AC253576.2-201ENST00000618815 580 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AP000943.4-201ENST00000622912 357 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.68□□□□□ -1.66
LIMK1P53667 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 AC018529.3-201ENST00000624212 2254 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 TLK1P1-201ENST00000456760 2440 ntBASIC4.68□□□□□ -1.66
LIMK1P53667 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.68□□□□□ -1.66
LIMK1P53667 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIMK1P53667 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LIMK1P53667 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
LIMK1P53667 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.68□□□□□ -1.66
LIMK1P53667 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.67□□□□□ -1.66
LIMK1P53667 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIMK1P53667 AC134882.1-201ENST00000603738 1676 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms