Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 AC112492.1-201ENST00000449607 712 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AC108463.1-201ENST00000450258 347 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF4P48230 RPS7P7-201ENST00000463499 571 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 RPL21P126-201ENST00000470049 478 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF4P48230 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.46□□□□□ -1.54
TM4SF4P48230 AC015724.1-201ENST00000478577 156 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AC134050.1-201ENST00000495088 933 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF4P48230 TCP11X3P-202ENST00000514289 1254 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF4P48230 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF4P48230 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.46□□□□□ -1.54
TM4SF4P48230 SNORA74C-1-201ENST00000580726 201 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.46□□□□□ -1.54
TM4SF4P48230 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.46□□□□□ -1.54
TM4SF4P48230 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.46□□□□□ -1.54
TM4SF4P48230 AC009237.15-201ENST00000610252 501 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF4P48230 U3.53-201ENST00000628922 216 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF4P48230 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TM4SF4P48230 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 AC000367.1-201ENST00000452711 1766 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 CASC19-206ENST00000641028 1430 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 AL355578.1-201ENST00000607405 1328 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
TM4SF4P48230 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TM4SF4P48230 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AC133552.1-201ENST00000569988 4007 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.45□□□□□ -1.54
TM4SF4P48230 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 CASC19-204ENST00000641001 2055 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TM4SF4P48230 RNA5SP366-201ENST00000365454 123 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 OR1L1-202ENST00000373686 1083 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 RN7SKP97-201ENST00000410966 333 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF4P48230 RPL5P2-201ENST00000429598 854 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AC073052.1-201ENST00000440417 714 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 GAPDHP14-201ENST00000450472 937 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 RPL23AP44-201ENST00000482216 473 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 AC113347.3-201ENST00000509113 148 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 Y_RNA.719-201ENST00000517156 106 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 IGLVIV-65-201ENST00000517313 360 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AC006272.2-201ENST00000594725 163 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AL591034.3-201ENST00000605511 685 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 AC091979.2-201ENST00000607514 214 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 AL592148.2-201ENST00000612210 372 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 AC067931.1-201ENST00000624190 671 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 MIR3653-201ENST00000625572 110 ntBASIC5.45□□□□□ -1.54
TM4SF4P48230 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.45□□□□□ -1.54
TM4SF4P48230 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM4SF4P48230 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF4P48230 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.44□□□□□ -1.54
TM4SF4P48230 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.44□□□□□ -1.54
TM4SF4P48230 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF4P48230 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.44□□□□□ -1.54
TM4SF4P48230 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.44□□□□□ -1.54
TM4SF4P48230 MTND4P10-201ENST00000446199 1363 ntBASIC5.44□□□□□ -1.54
TM4SF4P48230 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TM4SF4P48230 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TM4SF4P48230 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF4P48230 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TM4SF4P48230 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF4P48230 HMGB1P5-201ENST00000255320 642 ntBASIC5.44□□□□□ -1.54
TM4SF4P48230 AL512646.1-201ENST00000269395 1077 ntBASIC5.44□□□□□ -1.54
TM4SF4P48230 SNORA71.2-201ENST00000364941 134 ntBASIC5.44□□□□□ -1.54
TM4SF4P48230 AC007618.1-201ENST00000366455 732 ntBASIC5.44□□□□□ -1.54
TM4SF4P48230 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.44□□□□□ -1.54
TM4SF4P48230 OR1L6-202ENST00000373684 1044 ntBASIC5.44□□□□□ -1.54
TM4SF4P48230 MIR670-201ENST00000390142 98 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms