Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4□□□□□ -1.77
NKX2-1P43699 AL139811.1-201ENST00000424779 2299 ntBASIC4□□□□□ -1.77
NKX2-1P43699 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
NKX2-1P43699 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-1P43699 ERCC6-202ENST00000374127 1782 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NKX2-1P43699 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 ECM1P2-201ENST00000503354 1577 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC019155.1-201ENST00000382242 574 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 MIR513B-201ENST00000385136 84 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 MIR195-201ENST00000385194 87 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 RNU6-575P-201ENST00000411326 105 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 PRELID3BP11-201ENST00000414230 479 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AL356320.2-201ENST00000417263 507 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 BMS1P13-201ENST00000417301 885 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AL449283.1-202ENST00000418249 604 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-1P43699 OR2X1P-201ENST00000421144 687 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 BX323845.1-201ENST00000432417 179 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-1P43699 MTND1P26-201ENST00000440488 538 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AL354714.3-201ENST00000447284 493 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC144530.1-201ENST00000452862 555 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 MRPL42P4-201ENST00000453267 443 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 PTGES3P5-201ENST00000455109 434 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 APOOP2-201ENST00000461561 539 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
NKX2-1P43699 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC023632.1-201ENST00000518463 375 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 SOD1P3-201ENST00000518682 454 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 MTATP6P15-201ENST00000527233 835 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-1P43699 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC090695.1-201ENST00000561269 1222 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC009097.3-201ENST00000563557 1018 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC113368.1-201ENST00000603736 382 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC005191.1-201ENST00000603950 358 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AL583856.2-201ENST00000606298 543 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC016877.3-201ENST00000606778 504 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AP000238.1-201ENST00000608759 426 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC011330.2-201ENST00000621680 635 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AL157770.1-201ENST00000623049 439 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AC005086.4-201ENST00000623065 213 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AP002782.1-201ENST00000623107 614 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-1P43699 LINC02211-204ENST00000642024 1070 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
NKX2-1P43699 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-1P43699 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC011978.2-201ENST00000569835 2054 ntBASIC3.99□□□□□ -1.77
NKX2-1P43699 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-1P43699 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-1P43699 Z95327.2-201ENST00000414579 1873 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 AL445487.1-201ENST00000415694 1580 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 AL049555.1-201ENST00000562834 1933 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NKX2-1P43699 MIR323A-201ENST00000362199 86 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 RNA5SP372-201ENST00000390836 115 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 SFR1P1-201ENST00000403720 688 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 VDAC1P9-201ENST00000412766 841 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms