Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 CYCSP29-201ENST00000533731 318 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.09□□□□□ -1.75
SHMT2P34897 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 AL590392.1-201ENST00000604960 446 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.09□□□□□ -1.75
SHMT2P34897 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.75
SHMT2P34897 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.09□□□□□ -1.75
SHMT2P34897 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHMT2P34897 AC022893.2-201ENST00000564832 3296 ntBASIC4.09□□□□□ -1.76
SHMT2P34897 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
SHMT2P34897 PHKBP1-201ENST00000450951 1951 ntBASIC4.09□□□□□ -1.76
SHMT2P34897 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SHMT2P34897 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.08□□□□□ -1.76
SHMT2P34897 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SHMT2P34897 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.08□□□□□ -1.76
SHMT2P34897 RSL24D1P6-201ENST00000426934 401 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 MTND2P2-201ENST00000434633 945 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.08□□□□□ -1.76
SHMT2P34897 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 EIF4A1P11-201ENST00000451239 222 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 MTND3P4-201ENST00000453537 303 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 AC133473.1-201ENST00000455173 299 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 CCDC75P1-201ENST00000469247 791 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SHMT2P34897 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC108145.1-201ENST00000503770 153 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 NOL8P1-201ENST00000508336 3529 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 AC021146.7-201ENST00000509604 775 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 ACTR6P1-201ENST00000514311 1104 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC090819.1-201ENST00000523800 1111 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC068446.3-201ENST00000555285 382 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC012414.2-201ENST00000559474 187 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.08□□□□□ -1.76
SHMT2P34897 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.08□□□□□ -1.76
SHMT2P34897 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SHMT2P34897 AC084373.1-201ENST00000603311 235 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 AP004372.1-201ENST00000604842 844 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 AC100814.1-201ENST00000606963 623 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SHMT2P34897 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.08□□□□□ -1.76
SHMT2P34897 LINC00216-201ENST00000623548 1126 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 AC012020.1-201ENST00000624541 1728 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 OR52H1-202ENST00000641796 1061 ntBASIC4.08□□□□□ -1.76
SHMT2P34897 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHMT2P34897 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
SHMT2P34897 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.07□□□□□ -1.76
SHMT2P34897 HSPD1P11-201ENST00000508643 1702 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AC092162.3-201ENST00000624511 1624 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SHMT2P34897 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SHMT2P34897 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHMT2P34897 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHMT2P34897 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.07□□□□□ -1.76
SHMT2P34897 GSTA12P-201ENST00000402398 508 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.07□□□□□ -1.76
SHMT2P34897 JKAMPP1-201ENST00000413804 919 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AC108032.1-201ENST00000416706 207 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.07□□□□□ -1.76
SHMT2P34897 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.07□□□□□ -1.76
SHMT2P34897 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 COX6CP15-201ENST00000426313 211 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AL158073.1-201ENST00000426848 1104 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 TRIM60P13-201ENST00000432350 1283 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AC114878.1-201ENST00000441166 358 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 FGF7P3-201ENST00000454645 303 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHMT2P34897 RNA5SP246-201ENST00000458909 119 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.07□□□□□ -1.76
SHMT2P34897 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.07□□□□□ -1.76
SHMT2P34897 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.07□□□□□ -1.76
SHMT2P34897 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.07□□□□□ -1.76
SHMT2P34897 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.07□□□□□ -1.76
SHMT2P34897 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AC006116.5-201ENST00000591936 559 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.07□□□□□ -1.76
SHMT2P34897 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms