Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 MTATP6P22-201ENST00000507369 598 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC13P31276 HMGB3P13-201ENST00000511263 607 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC13P31276 PTP4A1P6-201ENST00000531034 478 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AC025260.1-201ENST00000548858 430 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AL132657.2-201ENST00000564417 358 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AC015912.2-201ENST00000571053 181 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 RN7SL652P-201ENST00000577769 300 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AP001180.3-201ENST00000582221 145 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC13P31276 ZNF92P2-201ENST00000600543 1059 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AP003117.1-201ENST00000602771 554 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 OR7A19P-201ENST00000608051 733 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AL445493.3-201ENST00000619568 477 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC13P31276 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC13P31276 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 AL731566.1-201ENST00000620490 1937 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AC135352.1-201ENST00000506173 1418 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC13P31276 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 AP001642.1-201ENST00000624727 2117 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC13P31276 RNA5SP28-201ENST00000363841 119 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 RNA5SP509-201ENST00000364577 119 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 RNA5SP397-201ENST00000391323 118 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 RPL23AP59-201ENST00000399415 461 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 RNU2-65P-201ENST00000410162 185 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 RNU2-72P-201ENST00000411175 163 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 RPS12P23-201ENST00000419579 400 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 EIF4A1P1-201ENST00000420241 934 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 UQCRBP1-201ENST00000421129 336 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC13P31276 AL390879.2-203ENST00000426943 1121 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AL590762.3-201ENST00000436372 640 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AC044797.1-201ENST00000445744 679 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AL162591.2-201ENST00000449634 317 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 CYCSP34-201ENST00000458172 304 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AC091167.1-201ENST00000492017 396 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC13P31276 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC13P31276 RNU6-1102P-201ENST00000516149 96 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 AC008562.1-201ENST00000521763 330 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC13P31276 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC13P31276 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC13P31276 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 IMMP1LP1-201ENST00000605170 488 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 ARF4P1-201ENST00000605447 541 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AL451064.1-201ENST00000607718 471 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AC105429.2-201ENST00000610567 517 ntBASIC4.81□□□□□ -1.64
HOXC13P31276 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HOXC13P31276 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 SALL4P2-201ENST00000423288 2910 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
HOXC13P31276 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC13P31276 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXC13P31276 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 SNORA48.7-201ENST00000391302 135 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 RPL7AP25-201ENST00000423357 805 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 AC096992.1-201ENST00000459808 709 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AL591473.1-201ENST00000464297 313 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 RPL21P126-201ENST00000470049 478 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 AC005351.1-201ENST00000511152 786 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AC093840.1-201ENST00000511599 336 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AC007016.1-201ENST00000512110 244 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 IGLVIV-65-201ENST00000517313 360 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 BNIP3P5-201ENST00000562290 498 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AC007224.1-201ENST00000564410 144 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AC106785.1-201ENST00000565935 262 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AC079148.1-201ENST00000565944 819 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AC090751.1-201ENST00000566966 267 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 LLPHP1-201ENST00000603571 367 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 MIR6716-201ENST00000613413 80 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC13P31276 AL158196.1-201ENST00000616786 434 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC13P31276 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXC13P31276 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms