Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC114814.2-201ENST00000419195 485 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 RPL23AP25-201ENST00000430973 463 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 BX119904.1-201ENST00000432026 348 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 RPL7P33-201ENST00000444159 742 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AC012671.1-201ENST00000451912 203 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 RPL37P3-201ENST00000456825 293 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 RN7SL481P-201ENST00000477764 299 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN6P29350 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN6P29350 HMGB3P13-201ENST00000511263 607 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN6P29350 RN7SKP92-201ENST00000517266 244 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN6P29350 AC025918.2-201ENST00000558683 763 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AC115085.1-201ENST00000588924 229 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN6P29350 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN6P29350 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 AC008745.1-201ENST00000604064 271 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AC019193.2-201ENST00000610012 634 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 AL138721.1-201ENST00000616756 179 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 MIR6810-201ENST00000622701 70 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 Z98755.1-201ENST00000407015 1384 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN6P29350 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN6P29350 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTPN6P29350 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PTPN6P29350 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PTPN6P29350 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PTPN6P29350 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN6P29350 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPN6P29350 AC134882.1-201ENST00000603738 1676 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 AL592148.3-201ENST00000608771 2646 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AC108467.2-201ENST00000617640 1597 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PTPN6P29350 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 RNA5SP52-201ENST00000362448 134 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 RNA5SP28-201ENST00000363841 119 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PTPN6P29350 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 GTF2IP2-201ENST00000424290 697 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AP001324.1-201ENST00000428553 399 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPN6P29350 MTND4P15-201ENST00000437913 1033 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN6P29350 AL353093.1-201ENST00000441292 436 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AC097499.1-201ENST00000444277 208 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 ARL2BPP10-201ENST00000446487 531 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN6P29350 AL162591.2-201ENST00000449634 317 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 RPL7AP28-201ENST00000464513 571 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 RN7SL459P-201ENST00000481078 302 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN6P29350 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN6P29350 POLR2KP1-201ENST00000553226 168 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN6P29350 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.2□□□□□ -1.74
PTPN6P29350 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN6P29350 AC068790.4-201ENST00000602474 263 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AC018618.2-201ENST00000604770 446 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 KATNBL1P5-201ENST00000605015 517 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPN6P29350 Z98200.1-201ENST00000607298 470 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN6P29350 MIR378J-201ENST00000611988 109 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN6P29350 AC006971.1-201ENST00000407916 4486 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN6P29350 MFSD8-220ENST00000641243 1422 ntBASIC4.2□□□□□ -1.74
PTPN6P29350 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN6P29350 LINC01347-201ENST00000417964 355 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms