Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC025465.4-201ENST00000513422 638 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 CYCSP29-201ENST00000533731 318 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.93□□□□□ -1.3
RXRBP28702 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 AC007954.1-201ENST00000554198 494 ntBASIC6.93□□□□□ -1.3
RXRBP28702 MIR3939-201ENST00000582614 106 ntBASIC6.93□□□□□ -1.3
RXRBP28702 NANOGP3-201ENST00000605855 286 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AL159169.3-201ENST00000608871 561 ntBASIC6.93□□□□□ -1.3
RXRBP28702 AL607023.1-201ENST00000620045 248 ntBASIC6.93□□□□□ -1.3
RXRBP28702 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.93□□□□□ -1.3
RXRBP28702 PCMTD1P7-201ENST00000634506 357 ntBASIC6.93□□□□□ -1.3
RXRBP28702 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 CCT8P1-201ENST00000413611 1657 ntBASIC6.93□□□□□ -1.3
RXRBP28702 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.93□□□□□ -1.3
RXRBP28702 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RXRBP28702 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
RXRBP28702 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RXRBP28702 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 AC034229.2-201ENST00000566945 2508 ntBASIC6.92□□□□□ -1.3
RXRBP28702 ELF2P3-201ENST00000445099 1506 ntBASIC6.92□□□□□ -1.3
RXRBP28702 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.92□□□□□ -1.3
RXRBP28702 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 AC009951.1-201ENST00000623674 2614 ntBASIC6.92□□□□□ -1.3
RXRBP28702 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 IL6STP1-201ENST00000346911 1020 ntBASIC6.92□□□□□ -1.3
RXRBP28702 RNA5SP28-201ENST00000363841 119 ntBASIC6.92□□□□□ -1.3
RXRBP28702 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RXRBP28702 RNU6-116P-201ENST00000384042 109 ntBASIC6.92□□□□□ -1.3
RXRBP28702 MIR670-201ENST00000390142 98 ntBASIC6.92□□□□□ -1.3
RXRBP28702 RN7SKP114-201ENST00000410327 279 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.92□□□□□ -1.3
RXRBP28702 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.92□□□□□ -1.3
RXRBP28702 MED14P1-201ENST00000430517 648 ntBASIC6.92□□□□□ -1.3
RXRBP28702 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.92□□□□□ -1.3
RXRBP28702 KRT8P51-201ENST00000438938 274 ntBASIC6.92□□□□□ -1.3
RXRBP28702 ARAFP2-201ENST00000440565 559 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AL662791.1-201ENST00000441992 928 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AC112653.1-201ENST00000443851 386 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AL137845.2-201ENST00000444292 988 ntBASIC6.92□□□□□ -1.3
RXRBP28702 BUD31P2-201ENST00000449374 300 ntBASIC6.92□□□□□ -1.3
RXRBP28702 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.92□□□□□ -1.3
RXRBP28702 SNRPGP9-201ENST00000456025 225 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AL121769.1-201ENST00000469473 401 ntBASIC6.92□□□□□ -1.3
RXRBP28702 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.92□□□□□ -1.3
RXRBP28702 FAM92A1P2-202ENST00000504766 877 ntBASIC6.92□□□□□ -1.3
RXRBP28702 ARL2BPP4-201ENST00000506854 471 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.92□□□□□ -1.3
RXRBP28702 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.92□□□□□ -1.3
RXRBP28702 MTCO1P35-201ENST00000515270 228 ntBASIC6.92□□□□□ -1.3
RXRBP28702 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.92□□□□□ -1.3
RXRBP28702 RNU6-1334P-201ENST00000516032 105 ntBASIC6.92□□□□□ -1.3
RXRBP28702 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.92□□□□□ -1.3
RXRBP28702 ZNF519P2-201ENST00000557032 169 ntBASIC6.92□□□□□ -1.3
RXRBP28702 NPM1P42-201ENST00000560329 862 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AC009063.1-201ENST00000563342 702 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AC006338.1-201ENST00000618453 749 ntBASIC6.92□□□□□ -1.3
RXRBP28702 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 AC135068.5-201ENST00000624197 983 ntBASIC6.92□□□□□ -1.3
RXRBP28702 AL157786.1-207ENST00000627771 695 ntBASIC6.92□□□□□ -1.3
RXRBP28702 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 AC011477.1-204ENST00000623416 1325 ntBASIC6.92□□□□□ -1.3
RXRBP28702 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.92□□□□□ -1.3
RXRBP28702 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
RXRBP28702 AL121768.1-201ENST00000613917 2544 ntBASIC6.92□□□□□ -1.3
RXRBP28702 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RXRBP28702 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 AC092326.2-201ENST00000624772 1561 ntBASIC6.91□□□□□ -1.3
RXRBP28702 SAMMSON-226ENST00000642089 1582 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AC020656.2-201ENST00000613291 5309 ntBASIC6.91□□□□□ -1.3
RXRBP28702 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.91□□□□□ -1.3
RXRBP28702 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 TTC39DP-201ENST00000416781 1688 ntBASIC6.91□□□□□ -1.3
RXRBP28702 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.91□□□□□ -1.3
RXRBP28702 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 RNU6-931P-201ENST00000363850 107 ntBASIC6.91□□□□□ -1.3
RXRBP28702 RNA5SP387-201ENST00000364226 106 ntBASIC6.91□□□□□ -1.3
RXRBP28702 Y_RNA.256-201ENST00000364594 104 ntBASIC6.91□□□□□ -1.3
RXRBP28702 RNA5SP251-201ENST00000410614 137 ntBASIC6.91□□□□□ -1.3
RXRBP28702 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms