Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
VARSP26640 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
VARSP26640 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.86□□□□□ -1.31
VARSP26640 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
VARSP26640 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.86□□□□□ -1.31
VARSP26640 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 AL021877.2-201ENST00000624442 10684 ntBASIC6.86□□□□□ -1.31
VARSP26640 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
VARSP26640 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 RPL12P13-201ENST00000310055 497 ntBASIC6.86□□□□□ -1.31
VARSP26640 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 RNU6-1040P-201ENST00000383974 107 ntBASIC6.86□□□□□ -1.31
VARSP26640 AL049697.2-201ENST00000403708 294 ntBASIC6.86□□□□□ -1.31
VARSP26640 AL606923.1-201ENST00000406616 190 ntBASIC6.86□□□□□ -1.31
VARSP26640 RNU2-64P-201ENST00000411315 191 ntBASIC6.86□□□□□ -1.31
VARSP26640 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.86□□□□□ -1.31
VARSP26640 DPH3P2-201ENST00000422618 250 ntBASIC6.86□□□□□ -1.31
VARSP26640 AC233981.1-201ENST00000423224 461 ntBASIC6.86□□□□□ -1.31
VARSP26640 AC093151.1-201ENST00000427711 313 ntBASIC6.86□□□□□ -1.31
VARSP26640 NRBF2P3-201ENST00000432731 865 ntBASIC6.86□□□□□ -1.31
VARSP26640 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.86□□□□□ -1.31
VARSP26640 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.86□□□□□ -1.31
VARSP26640 AC004980.3-201ENST00000447046 365 ntBASIC6.86□□□□□ -1.31
VARSP26640 SNORA81.1-201ENST00000458922 177 ntBASIC6.86□□□□□ -1.31
VARSP26640 AC005165.2-201ENST00000466070 380 ntBASIC6.86□□□□□ -1.31
VARSP26640 RPL23AP12-201ENST00000467573 473 ntBASIC6.86□□□□□ -1.31
VARSP26640 RPS14P8-201ENST00000478778 369 ntBASIC6.86□□□□□ -1.31
VARSP26640 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
VARSP26640 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.86□□□□□ -1.31
VARSP26640 Y_RNA.668-201ENST00000516233 93 ntBASIC6.86□□□□□ -1.31
VARSP26640 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.86□□□□□ -1.31
VARSP26640 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.86□□□□□ -1.31
VARSP26640 AC007375.1-201ENST00000554513 578 ntBASIC6.86□□□□□ -1.31
VARSP26640 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 EEF1B2P1-201ENST00000567221 672 ntBASIC6.86□□□□□ -1.31
VARSP26640 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.86□□□□□ -1.31
VARSP26640 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.86□□□□□ -1.31
VARSP26640 AC034229.6-201ENST00000623704 224 ntBASIC6.86□□□□□ -1.31
VARSP26640 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
VARSP26640 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.86□□□□□ -1.31
VARSP26640 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
VARSP26640 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
VARSP26640 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VARSP26640 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
VARSP26640 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.85□□□□□ -1.31
VARSP26640 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 PNPT1P2-201ENST00000456768 2050 ntBASIC6.85□□□□□ -1.31
VARSP26640 AC007996.1-201ENST00000620414 2821 ntBASIC6.85□□□□□ -1.31
VARSP26640 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
VARSP26640 AC005618.1-201ENST00000606901 3148 ntBASIC6.85□□□□□ -1.31
VARSP26640 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 Y_RNA.153-201ENST00000363615 91 ntBASIC6.85□□□□□ -1.31
VARSP26640 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
VARSP26640 Y_RNA.455-201ENST00000384230 98 ntBASIC6.85□□□□□ -1.31
VARSP26640 RNU1-56P-201ENST00000391303 164 ntBASIC6.85□□□□□ -1.31
VARSP26640 AL590290.1-201ENST00000405336 380 ntBASIC6.85□□□□□ -1.31
VARSP26640 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.85□□□□□ -1.31
VARSP26640 RN7SKP254-201ENST00000410685 310 ntBASIC6.85□□□□□ -1.31
VARSP26640 AC234781.4-201ENST00000419384 244 ntBASIC6.85□□□□□ -1.31
VARSP26640 UQCRHP1-204ENST00000424609 274 ntBASIC6.85□□□□□ -1.31
VARSP26640 GAPDHP69-201ENST00000425504 1008 ntBASIC6.85□□□□□ -1.31
VARSP26640 HMGB1P12-201ENST00000438594 598 ntBASIC6.85□□□□□ -1.31
VARSP26640 AC009237.4-201ENST00000441078 238 ntBASIC6.85□□□□□ -1.31
VARSP26640 AL450996.1-201ENST00000445574 1202 ntBASIC6.85□□□□□ -1.31
VARSP26640 RPL21P23-201ENST00000446654 460 ntBASIC6.85□□□□□ -1.31
VARSP26640 AL034399.1-201ENST00000451535 380 ntBASIC6.85□□□□□ -1.31
VARSP26640 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.85□□□□□ -1.31
VARSP26640 PFN1P6-201ENST00000476786 399 ntBASIC6.85□□□□□ -1.31
VARSP26640 RPL37P23-201ENST00000492641 294 ntBASIC6.85□□□□□ -1.31
VARSP26640 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.85□□□□□ -1.31
VARSP26640 AK3P4-201ENST00000504283 583 ntBASIC6.85□□□□□ -1.31
VARSP26640 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.85□□□□□ -1.31
VARSP26640 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 AP000889.1-201ENST00000530968 660 ntBASIC6.85□□□□□ -1.31
VARSP26640 HSPE1P3-201ENST00000559254 309 ntBASIC6.85□□□□□ -1.31
VARSP26640 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.85□□□□□ -1.31
VARSP26640 AC015818.6-201ENST00000584274 634 ntBASIC6.85□□□□□ -1.31
VARSP26640 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.85□□□□□ -1.31
VARSP26640 BNIP3P16-201ENST00000589779 534 ntBASIC6.85□□□□□ -1.31
VARSP26640 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 AC006157.1-201ENST00000611750 366 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms