Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.93□□□□□ -1.3
RFX1P22670 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.93□□□□□ -1.3
RFX1P22670 FRG1BP-201ENST00000278882 761 ntBASIC6.93□□□□□ -1.3
RFX1P22670 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.93□□□□□ -1.3
RFX1P22670 RNU6-343P-201ENST00000364709 104 ntBASIC6.93□□□□□ -1.3
RFX1P22670 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
RFX1P22670 RPL23AP32-201ENST00000395315 459 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AC016769.3-201ENST00000396562 315 ntBASIC6.93□□□□□ -1.3
RFX1P22670 MRPL42P2-201ENST00000403169 426 ntBASIC6.93□□□□□ -1.3
RFX1P22670 HMGA1P8-201ENST00000414130 321 ntBASIC6.93□□□□□ -1.3
RFX1P22670 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX1P22670 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX1P22670 RPL31P35-201ENST00000431058 377 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX1P22670 HSPE1P28-201ENST00000443139 211 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AL136380.1-201ENST00000447970 162 ntBASIC6.93□□□□□ -1.3
RFX1P22670 TCEA1P1-201ENST00000449716 880 ntBASIC6.93□□□□□ -1.3
RFX1P22670 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX1P22670 AC023194.1-201ENST00000493084 308 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX1P22670 MTND3P22-201ENST00000510932 243 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.93□□□□□ -1.3
RFX1P22670 AC022616.6-201ENST00000520479 119 ntBASIC6.93□□□□□ -1.3
RFX1P22670 IGKV3D-34-201ENST00000522638 302 ntBASIC6.93□□□□□ -1.3
RFX1P22670 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX1P22670 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.93□□□□□ -1.3
RFX1P22670 AC002519.2-203ENST00000567043 837 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 AC008521.2-201ENST00000591021 259 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AC027243.2-201ENST00000602530 724 ntBASIC6.93□□□□□ -1.3
RFX1P22670 RPL23AP92-201ENST00000603609 255 ntBASIC6.93□□□□□ -1.3
RFX1P22670 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 AL161734.1-201ENST00000609720 557 ntBASIC6.93□□□□□ -1.3
RFX1P22670 BX664608.1-201ENST00000610519 487 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AC010133.1-201ENST00000615809 842 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AC139792.3-201ENST00000623525 224 ntBASIC6.93□□□□□ -1.3
RFX1P22670 AC129915.3-201ENST00000634128 948 ntBASIC6.93□□□□□ -1.3
RFX1P22670 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX1P22670 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 MAPK10-287ENST00000641217 3037 ntBASIC6.93□□□□□ -1.3
RFX1P22670 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 AP005432.1-201ENST00000580891 3485 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.92□□□□□ -1.3
RFX1P22670 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
RFX1P22670 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RFX1P22670 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 RNU6-744P-201ENST00000365557 107 ntBASIC6.92□□□□□ -1.3
RFX1P22670 RNU6-1316P-201ENST00000384242 108 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AL024474.1-201ENST00000404655 591 ntBASIC6.92□□□□□ -1.3
RFX1P22670 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.92□□□□□ -1.3
RFX1P22670 UBE2V1P14-201ENST00000415815 558 ntBASIC6.92□□□□□ -1.3
RFX1P22670 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 AL031736.2-201ENST00000426573 787 ntBASIC6.92□□□□□ -1.3
RFX1P22670 RPL36P19-201ENST00000430744 301 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.92□□□□□ -1.3
RFX1P22670 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.92□□□□□ -1.3
RFX1P22670 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 AC097173.1-201ENST00000505862 819 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AC018710.1-201ENST00000506509 158 ntBASIC6.92□□□□□ -1.3
RFX1P22670 snoU109.5-201ENST00000516231 132 ntBASIC6.92□□□□□ -1.3
RFX1P22670 RNU6-445P-201ENST00000516949 107 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.92□□□□□ -1.3
RFX1P22670 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.92□□□□□ -1.3
RFX1P22670 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.92□□□□□ -1.3
RFX1P22670 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.92□□□□□ -1.3
RFX1P22670 AL359212.1-201ENST00000556608 614 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AC009120.3-201ENST00000563335 499 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.92□□□□□ -1.3
RFX1P22670 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.92□□□□□ -1.3
RFX1P22670 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.92□□□□□ -1.3
RFX1P22670 AC068790.5-201ENST00000602741 355 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AC073091.2-201ENST00000603205 907 ntBASIC6.92□□□□□ -1.3
RFX1P22670 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 AL096712.1-201ENST00000614561 159 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AC009159.1-201ENST00000618386 642 ntBASIC6.92□□□□□ -1.3
RFX1P22670 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RFX1P22670 AL732618.1-201ENST00000623251 301 ntBASIC6.92□□□□□ -1.3
RFX1P22670 AC006065.6-201ENST00000625201 545 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms