Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC3P19447 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC3P19447 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.69□□□□□ -1.34
ERCC3P19447 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC3P19447 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC3P19447 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC3P19447 AC092447.7-201ENST00000422212 1621 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
ERCC3P19447 AL356473.1-201ENST00000406203 1408 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
ERCC3P19447 AP002907.1-201ENST00000606361 1430 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC3P19447 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC3P19447 SNORA75-201ENST00000384158 137 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 RPS24P12-201ENST00000402084 394 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC3P19447 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC3P19447 AC234779.1-201ENST00000425910 285 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 AL158073.1-201ENST00000426848 1104 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.68□□□□□ -1.34
ERCC3P19447 OR2B8P-201ENST00000432841 938 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC3P19447 AL663074.2-201ENST00000440621 479 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 RPL23AP16-201ENST00000441715 421 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC023141.8-201ENST00000442554 208 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 PAXBP1P1-201ENST00000449315 447 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 PDSS1P2-201ENST00000449397 678 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 RPL7P31-201ENST00000450192 724 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 RPS15AP17-201ENST00000470598 390 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 AC011825.1-201ENST00000484967 388 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 PRELID3BP7-201ENST00000503606 469 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC3P19447 AC018797.3-201ENST00000513388 1241 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 DUXAP2-201ENST00000519198 589 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC3P19447 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC3P19447 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC3P19447 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 OR6C73P-201ENST00000546432 358 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC3P19447 CR383656.6-201ENST00000550518 394 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC074029.1-201ENST00000552531 1044 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.68□□□□□ -1.34
ERCC3P19447 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.68□□□□□ -1.34
ERCC3P19447 ZNF519P3-201ENST00000557158 1032 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.68□□□□□ -1.34
ERCC3P19447 AL133457.1-201ENST00000564251 987 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 MIR4637-201ENST00000582405 84 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC006566.1-201ENST00000608943 513 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC3P19447 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 AC235565.1-201ENST00000456962 1325 ntBASIC6.68□□□□□ -1.34
ERCC3P19447 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC3P19447 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 OR4G11P-202ENST00000642116 1414 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
ERCC3P19447 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.67□□□□□ -1.34
ERCC3P19447 AL118496.1-201ENST00000440201 1812 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.67□□□□□ -1.34
ERCC3P19447 RNU6-289P-201ENST00000364093 107 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 RNU6-1293P-201ENST00000384077 107 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 RNU6-171P-201ENST00000384354 107 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 RNU6-517P-201ENST00000384362 110 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 U8.14-201ENST00000390843 143 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 RPL31P52-201ENST00000407532 367 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 AL357752.1-201ENST00000412817 349 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 UBTFL3-201ENST00000418934 1024 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC3P19447 NPM1P18-201ENST00000434232 732 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 AC105402.2-201ENST00000438503 358 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.67□□□□□ -1.34
ERCC3P19447 AL591623.2-201ENST00000449978 222 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.67□□□□□ -1.34
ERCC3P19447 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.67□□□□□ -1.34
ERCC3P19447 AL445687.2-201ENST00000458156 728 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 OR9M1P-201ENST00000459641 921 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 UBTFL6-201ENST00000477929 1024 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 UBA52P7-201ENST00000486088 380 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 RPL32P33-201ENST00000487023 394 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.67□□□□□ -1.34
ERCC3P19447 FTH1P24-201ENST00000503502 462 ntBASIC6.67□□□□□ -1.34
ERCC3P19447 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC3P19447 ST13P12-201ENST00000508958 1094 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms