Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATF3P18847 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF3P18847 DNAJC19P6-201ENST00000401853 280 ntBASIC6.19□□□□□ -1.42
ATF3P18847 OR8G2P-201ENST00000412796 908 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF3P18847 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF3P18847 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF3P18847 AL139095.3-201ENST00000419672 1203 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AL354766.1-201ENST00000423396 542 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AC018644.1-201ENST00000429934 551 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF3P18847 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF3P18847 snoU109.3-201ENST00000459477 145 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AC020890.1-201ENST00000491837 504 ntBASIC6.19□□□□□ -1.42
ATF3P18847 SCARNA13-201ENST00000516672 275 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AC105233.3-201ENST00000531125 744 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF3P18847 AC091057.3-201ENST00000602684 733 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AC096947.1-201ENST00000603233 470 ntBASIC6.19□□□□□ -1.42
ATF3P18847 RNU4-89P-201ENST00000607443 133 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AC021422.1-201ENST00000621212 473 ntBASIC6.19□□□□□ -1.42
ATF3P18847 AC024595.1-201ENST00000623088 387 ntBASIC6.19□□□□□ -1.42
ATF3P18847 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ATF3P18847 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF3P18847 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATF3P18847 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.19□□□□□ -1.42
ATF3P18847 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF3P18847 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
ATF3P18847 AP001284.1-201ENST00000528393 2118 ntBASIC6.19□□□□□ -1.42
ATF3P18847 TCP11X1-202ENST00000622971 1372 ntBASIC6.18□□□□□ -1.42
ATF3P18847 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF3P18847 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 RNU6-543P-201ENST00000362576 108 ntBASIC6.18□□□□□ -1.42
ATF3P18847 RNU5B-1-201ENST00000363286 116 ntBASIC6.18□□□□□ -1.42
ATF3P18847 U6.112-201ENST00000384129 70 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF3P18847 TRGV6-201ENST00000417928 299 ntBASIC6.18□□□□□ -1.42
ATF3P18847 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 YME1L1P1-201ENST00000429435 297 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AL050321.1-201ENST00000432363 400 ntBASIC6.18□□□□□ -1.42
ATF3P18847 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 SEPT14P24-201ENST00000447236 180 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 snoU13.24-201ENST00000458998 104 ntBASIC6.18□□□□□ -1.42
ATF3P18847 RPS4XP6-201ENST00000477670 797 ntBASIC6.18□□□□□ -1.42
ATF3P18847 RN7SL691P-201ENST00000494487 301 ntBASIC6.18□□□□□ -1.42
ATF3P18847 PRELID3BP6-201ENST00000503839 571 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AC026726.1-201ENST00000512859 601 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF3P18847 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF3P18847 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF3P18847 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 VN1R87P-201ENST00000596706 487 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF3P18847 AC093673.2-201ENST00000609674 331 ntBASIC6.18□□□□□ -1.42
ATF3P18847 CR392039.5-201ENST00000623201 510 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AL356121.2-201ENST00000624715 780 ntBASIC6.18□□□□□ -1.42
ATF3P18847 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.18□□□□□ -1.42
ATF3P18847 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 U6.107-201ENST00000637108 79 ntBASIC6.18□□□□□ -1.42
ATF3P18847 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.18□□□□□ -1.42
ATF3P18847 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 AC010329.2-201ENST00000595195 2737 ntBASIC6.18□□□□□ -1.42
ATF3P18847 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.18□□□□□ -1.42
ATF3P18847 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATF3P18847 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATF3P18847 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATF3P18847 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATF3P18847 AC104260.2-201ENST00000623551 3497 ntBASIC6.17□□□□□ -1.42
ATF3P18847 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ATF3P18847 RNU5E-10P-201ENST00000363506 118 ntBASIC6.17□□□□□ -1.42
ATF3P18847 RNA5SP130-201ENST00000364431 114 ntBASIC6.17□□□□□ -1.42
ATF3P18847 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATF3P18847 MIR3065-201ENST00000390137 79 ntBASIC6.17□□□□□ -1.42
ATF3P18847 RNU6-298P-201ENST00000390888 96 ntBASIC6.17□□□□□ -1.42
ATF3P18847 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.17□□□□□ -1.42
ATF3P18847 RPL21P65-201ENST00000406094 466 ntBASIC6.17□□□□□ -1.42
ATF3P18847 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.17□□□□□ -1.42
ATF3P18847 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.17□□□□□ -1.42
ATF3P18847 RGS17P1-201ENST00000423358 553 ntBASIC6.17□□□□□ -1.42
ATF3P18847 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.17□□□□□ -1.42
ATF3P18847 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.17□□□□□ -1.42
ATF3P18847 MTND2P40-201ENST00000436718 841 ntBASIC6.17□□□□□ -1.42
ATF3P18847 AC092170.1-201ENST00000440211 356 ntBASIC6.17□□□□□ -1.42
ATF3P18847 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.17□□□□□ -1.42
ATF3P18847 PRPF38AP1-201ENST00000451976 933 ntBASIC6.17□□□□□ -1.42
ATF3P18847 OR52E3P-201ENST00000452083 936 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms