Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN1P18031 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
PTPN1P18031 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN1P18031 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN1P18031 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PTPN1P18031 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN1P18031 AL590763.1-201ENST00000398297 1545 ntBASIC5.69□□□□□ -1.5
PTPN1P18031 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PTPN1P18031 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 U3.7-201ENST00000363668 216 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 Y_RNA.302-201ENST00000364997 102 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 MIR223-201ENST00000385204 110 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 RPL23AP47-201ENST00000408017 460 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 AC108075.1-201ENST00000424692 529 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 NPM1P22-201ENST00000427761 952 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 SKP1P3-201ENST00000429280 487 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 CYCSP11-201ENST00000436426 315 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 MTATP6P23-201ENST00000440153 476 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC092809.1-201ENST00000441469 474 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 RNA5SP269-201ENST00000459032 137 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 RN7SL197P-201ENST00000466981 299 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 RPL7P6-201ENST00000480903 738 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 BNIP3P41-201ENST00000503774 571 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN1P18031 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 RNA5SP92-201ENST00000516437 110 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 RNA5SP135-201ENST00000517019 125 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AP001189.2-201ENST00000527320 189 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.68□□□□□ -1.5
PTPN1P18031 AC016957.1-201ENST00000534895 309 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AL133241.1-201ENST00000556832 487 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
PTPN1P18031 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 AC069307.1-201ENST00000602820 447 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC091805.2-201ENST00000603848 235 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AP004247.3-201ENST00000608682 624 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 AC244107.2-201ENST00000611773 76 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PTPN1P18031 CYP4F35P-202ENST00000636121 390 ntBASIC5.68□□□□□ -1.5
PTPN1P18031 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN1P18031 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
PTPN1P18031 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN1P18031 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN1P18031 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPN1P18031 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN1P18031 AC011493.1-201ENST00000596753 1632 ntBASIC5.67□□□□□ -1.5
PTPN1P18031 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PTPN1P18031 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN1P18031 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPN1P18031 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 U3.2-201ENST00000362981 210 ntBASIC5.67□□□□□ -1.5
PTPN1P18031 RNU6-1066P-201ENST00000363573 105 ntBASIC5.67□□□□□ -1.5
PTPN1P18031 RNU6-660P-201ENST00000364566 109 ntBASIC5.67□□□□□ -1.5
PTPN1P18031 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN1P18031 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN1P18031 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN1P18031 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
PTPN1P18031 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN1P18031 VTI1BP4-201ENST00000427516 527 ntBASIC5.67□□□□□ -1.5
PTPN1P18031 RPL7P4-203ENST00000430239 730 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms