Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MTND6P6-201ENST00000478031 263 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC004815.1-201ENST00000484185 331 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC008953.1-201ENST00000497334 318 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC010627.1-201ENST00000503819 1294 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL1P09341 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL1P09341 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 RNU6-347P-201ENST00000516658 105 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL1P09341 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL1P09341 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL1P09341 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.06□□□□□ -1.92
CXCL1P09341 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL1P09341 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL1P09341 AC022968.1-201ENST00000567372 442 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 MIR3934-201ENST00000579806 107 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 MIR4646-201ENST00000580775 63 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AL592436.1-201ENST00000605135 558 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 GMCL1P2-201ENST00000605230 823 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 AC090246.1-201ENST00000616499 426 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL1P09341 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL1P09341 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL1P09341 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CXCL1P09341 C4BPAP1-201ENST00000415474 1893 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 AL353746.1-201ENST00000566293 6881 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.05□□□□□ -1.92
CXCL1P09341 AC090229.1-201ENST00000590983 1609 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 MTCO1P14-201ENST00000441695 1559 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 RNU6-304P-201ENST00000364855 107 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AL109941.1-201ENST00000401925 229 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 RN7SKP177-201ENST00000410567 355 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 RPS12P23-201ENST00000419579 400 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AC011998.1-201ENST00000433403 117 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 RPL12P11-201ENST00000439970 501 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL1P09341 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.05□□□□□ -1.92
CXCL1P09341 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 AP000926.1-201ENST00000479573 241 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL1P09341 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.05□□□□□ -1.92
CXCL1P09341 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL1P09341 FTH1P9-201ENST00000513251 355 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CXCL1P09341 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.05□□□□□ -1.92
CXCL1P09341 RNU7-143P-201ENST00000516781 65 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL1P09341 AC025260.1-201ENST00000548858 430 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.05□□□□□ -1.92
CXCL1P09341 AL389895.1-201ENST00000554127 252 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL1P09341 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.05□□□□□ -1.92
CXCL1P09341 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.05□□□□□ -1.92
CXCL1P09341 AL133247.2-201ENST00000603236 482 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL1P09341 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.05□□□□□ -1.92
CXCL1P09341 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL1P09341 MIR6826-201ENST00000617808 98 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.05□□□□□ -1.92
CXCL1P09341 MIR7153-201ENST00000637758 57 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 AC009452.1-201ENST00000640823 606 ntBASIC3.05□□□□□ -1.92
CXCL1P09341 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXCL1P09341 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CXCL1P09341 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.04□□□□□ -1.92
CXCL1P09341 MFSD8-220ENST00000641243 1422 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
CXCL1P09341 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CXCL1P09341 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL1P09341 OR4K15-201ENST00000305051 1216 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CXCL1P09341 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL1P09341 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 MIR1251-201ENST00000408552 70 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 AL049610.1-201ENST00000423374 372 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC104837.2-201ENST00000427236 424 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL1P09341 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 NANOGP10-201ENST00000453325 895 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC005229.2-201ENST00000456995 399 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 RPL6P9-201ENST00000466502 859 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 TRBV8-2-201ENST00000475637 270 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms