Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL392112.1-201ENST00000605115 829 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 AL445423.1-201ENST00000609941 536 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AC007490.1-201ENST00000624321 703 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DOAP06340 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DOAP06340 AL592148.3-201ENST00000608771 2646 ntBASIC5.6□□□□□ -1.51
HLA-DOAP06340 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC017007.4-201ENST00000503353 1352 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AL136164.3-201ENST00000624429 3978 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 RNU4-51P-201ENST00000364206 140 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 SNORA62-201ENST00000365493 153 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 MIR142-201ENST00000384835 87 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 MIR129-1-201ENST00000384972 72 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 RNU6-932P-201ENST00000391108 106 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AL034403.1-201ENST00000399414 885 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AL590084.1-201ENST00000407885 387 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AL590806.1-201ENST00000415818 853 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 AL034379.1-201ENST00000423216 253 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC234781.2-201ENST00000426370 994 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 RPL23AP1-201ENST00000428990 471 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 MTCO2P16-201ENST00000436962 677 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 TPT1P12-201ENST00000448968 492 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 NPM1P13-201ENST00000452663 865 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 GTF2IP12-201ENST00000456547 356 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 RNU5A-4P-201ENST00000516588 111 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 MIR4697-201ENST00000582977 78 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC105129.3-201ENST00000605455 485 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC124312.4-201ENST00000605533 310 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC016877.3-201ENST00000606778 504 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC073530.2-201ENST00000623987 261 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC011815.3-201ENST00000624194 473 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC010608.2-201ENST00000624830 470 ntBASIC5.59□□□□□ -1.51
HLA-DOAP06340 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DOAP06340 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DOAP06340 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DOAP06340 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.59□□□□□ -1.52
HLA-DOAP06340 SOCS5P3-201ENST00000425115 1576 ntBASIC5.59□□□□□ -1.52
HLA-DOAP06340 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DOAP06340 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 ZNF137P-201ENST00000456718 1920 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC092111.2-201ENST00000611627 1414 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 RNU6-623P-201ENST00000363143 105 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AL590762.2-201ENST00000395798 571 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 Z98745.1-201ENST00000402553 494 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 RNU6-648P-201ENST00000410190 107 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 RPS7P9-201ENST00000414704 586 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 GTF2IP2-201ENST00000424290 697 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 MRPS21P2-201ENST00000424704 264 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AL593851.1-201ENST00000426171 157 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AL035458.1-201ENST00000433096 585 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC093716.1-201ENST00000435923 377 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AL353706.1-201ENST00000436728 494 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 MTND5P2-201ENST00000442927 1142 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 HSFY3P-201ENST00000444242 1191 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC012512.1-201ENST00000446594 718 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 SEPT14P24-201ENST00000447236 180 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 USP9YP10-201ENST00000454868 628 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 RPS26P24-201ENST00000497656 331 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 USP9YP5-201ENST00000511770 630 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 MTND5P13-201ENST00000513046 1079 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms