Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RPL7P44-201ENST00000424827 742 ntBASIC6.16□□□□□ -1.42
APPP05067 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.16□□□□□ -1.42
APPP05067 PTMAP6-201ENST00000439110 327 ntBASIC6.16□□□□□ -1.42
APPP05067 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.16□□□□□ -1.42
APPP05067 AL591503.2-201ENST00000442314 1005 ntBASIC6.16□□□□□ -1.42
APPP05067 AL606662.1-201ENST00000445763 553 ntBASIC6.16□□□□□ -1.42
APPP05067 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 AP000936.2-201ENST00000447151 681 ntBASIC6.16□□□□□ -1.42
APPP05067 VN1R32P-201ENST00000452234 905 ntBASIC6.16□□□□□ -1.42
APPP05067 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.16□□□□□ -1.42
APPP05067 RPL31P3-201ENST00000458430 332 ntBASIC6.16□□□□□ -1.42
APPP05067 SYPL1P1-201ENST00000473622 768 ntBASIC6.16□□□□□ -1.42
APPP05067 BX284632.1-201ENST00000478218 541 ntBASIC6.16□□□□□ -1.42
APPP05067 LINC00888-204ENST00000487386 421 ntBASIC6.16□□□□□ -1.42
APPP05067 COX6B1P2-201ENST00000489624 230 ntBASIC6.16□□□□□ -1.42
APPP05067 AC109462.1-201ENST00000491087 368 ntBASIC6.16□□□□□ -1.42
APPP05067 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.16□□□□□ -1.42
APPP05067 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.16□□□□□ -1.42
APPP05067 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 IGKV2D-10-201ENST00000520194 281 ntBASIC6.16□□□□□ -1.42
APPP05067 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.16□□□□□ -1.42
APPP05067 AC007115.1-201ENST00000546853 234 ntBASIC6.16□□□□□ -1.42
APPP05067 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.16□□□□□ -1.42
APPP05067 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.16□□□□□ -1.42
APPP05067 AC068790.2-201ENST00000602601 557 ntBASIC6.16□□□□□ -1.42
APPP05067 AC096553.1-201ENST00000605169 829 ntBASIC6.16□□□□□ -1.42
APPP05067 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 AC013562.2-201ENST00000611632 603 ntBASIC6.16□□□□□ -1.42
APPP05067 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.16□□□□□ -1.42
APPP05067 AC022509.4-201ENST00000621404 572 ntBASIC6.16□□□□□ -1.42
APPP05067 MIR4278-201ENST00000636094 69 ntBASIC6.16□□□□□ -1.42
APPP05067 THAP12P5-201ENST00000405864 2275 ntBASIC6.16□□□□□ -1.42
APPP05067 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APPP05067 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APPP05067 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APPP05067 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.16□□□□□ -1.42
APPP05067 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APPP05067 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APPP05067 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
APPP05067 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.15□□□□□ -1.42
APPP05067 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 IGKV7-3-201ENST00000357453 298 ntBASIC6.15□□□□□ -1.42
APPP05067 SNORA74A-201ENST00000364089 198 ntBASIC6.15□□□□□ -1.42
APPP05067 Y_RNA.560-201ENST00000384689 102 ntBASIC6.15□□□□□ -1.42
APPP05067 SNORD65.1-201ENST00000390889 71 ntBASIC6.15□□□□□ -1.42
APPP05067 AL138880.1-201ENST00000405824 642 ntBASIC6.15□□□□□ -1.42
APPP05067 SNORA11C-201ENST00000408532 129 ntBASIC6.15□□□□□ -1.42
APPP05067 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 AL139421.1-201ENST00000423010 169 ntBASIC6.15□□□□□ -1.42
APPP05067 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.15□□□□□ -1.42
APPP05067 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 AC093155.1-201ENST00000440164 826 ntBASIC6.15□□□□□ -1.42
APPP05067 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.15□□□□□ -1.42
APPP05067 CEACAMP7-201ENST00000444105 496 ntBASIC6.15□□□□□ -1.42
APPP05067 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 CCDC75P1-201ENST00000469247 791 ntBASIC6.15□□□□□ -1.42
APPP05067 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.15□□□□□ -1.42
APPP05067 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.15□□□□□ -1.42
APPP05067 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.15□□□□□ -1.42
APPP05067 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APPP05067 AC124293.1-201ENST00000530034 493 ntBASIC6.15□□□□□ -1.42
APPP05067 AP000619.3-201ENST00000535634 1127 ntBASIC6.15□□□□□ -1.42
APPP05067 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
APPP05067 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.15□□□□□ -1.42
APPP05067 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.15□□□□□ -1.42
APPP05067 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
APPP05067 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.15□□□□□ -1.42
APPP05067 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.15□□□□□ -1.42
APPP05067 AC087763.1-201ENST00000603391 286 ntBASIC6.15□□□□□ -1.42
APPP05067 AC099676.1-201ENST00000608886 657 ntBASIC6.15□□□□□ -1.42
APPP05067 AC122133.1-201ENST00000613964 233 ntBASIC6.15□□□□□ -1.42
APPP05067 Z69908.1-201ENST00000622603 247 ntBASIC6.15□□□□□ -1.42
APPP05067 AF246928.1-201ENST00000623768 87 ntBASIC6.15□□□□□ -1.42
APPP05067 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.15□□□□□ -1.42
APPP05067 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.15□□□□□ -1.43
APPP05067 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
APPP05067 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms