Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AL445363.3-201ENST00000623080 671 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.65□□□□□ -1.82
HLA-DPB1P04440 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DPB1P04440 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DPB1P04440 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.65□□□□□ -1.82
HLA-DPB1P04440 AC007342.7-201ENST00000624610 2337 ntBASIC3.65□□□□□ -1.82
HLA-DPB1P04440 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
HLA-DPB1P04440 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 SNORA68.2-201ENST00000391263 128 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 GSTA12P-201ENST00000402398 508 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 RPS20P25-201ENST00000412447 352 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 FAR2P2-201ENST00000413041 594 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 RPL6P29-201ENST00000414863 865 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AL592293.2-201ENST00000422292 996 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AL157831.1-201ENST00000426134 473 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AL500522.2-201ENST00000448562 343 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC022431.1-201ENST00000450941 438 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 MTCO3P20-201ENST00000454926 688 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 RN7SL93P-201ENST00000463035 293 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC010307.1-201ENST00000467206 836 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 CDH12P2-201ENST00000504393 298 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC021087.2-201ENST00000504656 1203 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 RNA5SP519-201ENST00000516480 119 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 C1GALT1P3-201ENST00000522049 819 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 TVP23BP1-201ENST00000557500 617 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 EIF1P6-201ENST00000600054 334 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC114781.5-201ENST00000615297 108 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 LINC00216-201ENST00000623548 1126 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AP000843.1-201ENST00000624880 701 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 AC244205.2-202ENST00000635781 342 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 LINC00561-201ENST00000565815 2738 ntBASIC3.65□□□□□ -1.83
HLA-DPB1P04440 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DPB1P04440 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 ERCC6-202ENST00000374127 1782 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 OR4K17-201ENST00000315543 1032 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RNA5SP502-201ENST00000362694 119 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RNU1-132P-201ENST00000364300 164 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AL138878.1-201ENST00000405131 347 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RN7SKP222-201ENST00000410651 315 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RN7SKP235-201ENST00000410662 305 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AC016397.1-201ENST00000412463 242 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RPL18P10-201ENST00000425606 538 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AL365396.1-201ENST00000430854 671 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 MTCO1P57-201ENST00000432182 261 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 EIF2S2P2-201ENST00000447161 982 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AC243772.1-201ENST00000451620 410 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RPL10P17-201ENST00000453852 316 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AP002345.1-201ENST00000456493 928 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RPL7AP52-201ENST00000458096 790 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RN7SL303P-201ENST00000469773 251 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RN7SL481P-201ENST00000477764 299 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 ACTR6P1-201ENST00000514311 1104 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 RNA5SP49-201ENST00000516450 115 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AC034205.1-201ENST00000520621 638 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AC092851.1-201ENST00000535964 478 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 AC010435.1-201ENST00000623353 1177 ntBASIC3.64□□□□□ -1.83
HLA-DPB1P04440 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DPB1P04440 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms