Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR3934-201ENST00000579806 107 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 MIR4436B2-201ENST00000581415 91 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 MIR4436B1-201ENST00000583272 91 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AC110743.1-201ENST00000584870 478 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 EIF1P6-201ENST00000600054 334 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AC040174.2-201ENST00000602701 465 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AC139769.3-201ENST00000618383 175 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AL035461.2-201ENST00000619201 524 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AC015726.3-201ENST00000624501 418 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 U3.53-201ENST00000628922 216 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AC134882.1-201ENST00000603738 1676 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQA1P01909 AL021368.2-201ENST00000606125 5352 ntBASIC3.19□□□□□ -1.9
HLA-DQA1P01909 PNPT1P2-201ENST00000456768 2050 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 MTND4P21-201ENST00000453886 1357 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 RN7SKP103-201ENST00000363848 320 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 HMGN2P8-201ENST00000391458 268 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 MIR1179-201ENST00000408703 91 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 MIR1183-201ENST00000408856 89 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 RNU4-74P-201ENST00000411280 161 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 ARL2BPP3-201ENST00000421226 480 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 EIF1P3-201ENST00000423841 334 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 FAM204CP-201ENST00000424489 642 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 RPS12P10-201ENST00000427031 377 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 NPM1P24-201ENST00000428039 894 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 OR2B7P-201ENST00000429302 934 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL049745.1-201ENST00000433953 286 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL353597.2-202ENST00000434901 373 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 RPS26P40-201ENST00000435209 294 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC073648.4-201ENST00000442655 781 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 EIF4A1P11-201ENST00000451239 222 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 HIGD1AP8-201ENST00000453927 274 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 RPL32P9-201ENST00000487963 407 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 RPL31P61-201ENST00000496160 376 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 GAPDHP56-201ENST00000506031 988 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC021146.1-201ENST00000511202 716 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 OR5M2P-201ENST00000529003 936 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AP001880.2-201ENST00000538233 448 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 PCNPP1-201ENST00000552501 511 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC105129.1-201ENST00000560250 297 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC009117.1-201ENST00000563948 554 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL512782.1-201ENST00000603093 364 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL096803.3-201ENST00000609032 532 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AC243654.2-201ENST00000612843 443 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 U7.8-201ENST00000619968 63 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 HPVC1-201ENST00000629899 1198 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 OR2L1P-202ENST00000641567 1023 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 IPO8P1-201ENST00000455509 3109 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 AL451142.2-201ENST00000429076 2090 ntBASIC3.18□□□□□ -1.9
HLA-DQA1P01909 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1P01909 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RNA5SP191-201ENST00000362585 102 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RN7SKP149-201ENST00000363008 344 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms