Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFP01375 GNRHR2P1-201ENST00000555315 631 ntBASIC3.82□□□□□ -1.8
TNFP01375 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFP01375 AP000255.1-201ENST00000610276 676 ntBASIC3.82□□□□□ -1.8
TNFP01375 AL158196.1-201ENST00000616786 434 ntBASIC3.82□□□□□ -1.8
TNFP01375 AC131238.1-201ENST00000617135 328 ntBASIC3.82□□□□□ -1.8
TNFP01375 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFP01375 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.82□□□□□ -1.8
TNFP01375 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
TNFP01375 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFP01375 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 RNU1-108P-201ENST00000362556 161 ntBASIC3.81□□□□□ -1.8
TNFP01375 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TNFP01375 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TNFP01375 AL512430.2-201ENST00000406786 339 ntBASIC3.81□□□□□ -1.8
TNFP01375 AC092647.1-201ENST00000420654 287 ntBASIC3.81□□□□□ -1.8
TNFP01375 AL139247.1-201ENST00000422768 325 ntBASIC3.81□□□□□ -1.8
TNFP01375 AC083863.1-201ENST00000438811 231 ntBASIC3.81□□□□□ -1.8
TNFP01375 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFP01375 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFP01375 RNU6-964P-201ENST00000516524 69 ntBASIC3.81□□□□□ -1.8
TNFP01375 RNA5SP164-201ENST00000516533 110 ntBASIC3.81□□□□□ -1.8
TNFP01375 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFP01375 MYL12AP1-201ENST00000518490 515 ntBASIC3.81□□□□□ -1.8
TNFP01375 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFP01375 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.81□□□□□ -1.8
TNFP01375 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFP01375 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFP01375 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFP01375 AC087468.1-201ENST00000604365 630 ntBASIC3.81□□□□□ -1.8
TNFP01375 AL391497.1-201ENST00000608671 547 ntBASIC3.81□□□□□ -1.8
TNFP01375 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFP01375 AL121772.2-201ENST00000614331 297 ntBASIC3.81□□□□□ -1.8
TNFP01375 AC039056.2-201ENST00000622261 511 ntBASIC3.81□□□□□ -1.8
TNFP01375 AC073530.2-201ENST00000623987 261 ntBASIC3.81□□□□□ -1.8
TNFP01375 AP003499.2-201ENST00000624100 483 ntBASIC3.81□□□□□ -1.8
TNFP01375 OR8B1P-202ENST00000641132 1178 ntBASIC3.81□□□□□ -1.8
TNFP01375 AC138627.1-204ENST00000641894 765 ntBASIC3.81□□□□□ -1.8
TNFP01375 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFP01375 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TNFP01375 LINC02471-203ENST00000641941 4752 ntBASIC3.8□□□□□ -1.8
TNFP01375 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFP01375 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFP01375 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFP01375 OR10J6P-201ENST00000289731 930 ntBASIC3.8□□□□□ -1.8
TNFP01375 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFP01375 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFP01375 MIR137-201ENST00000385223 102 ntBASIC3.8□□□□□ -1.8
TNFP01375 RAB9AP3-201ENST00000412737 573 ntBASIC3.8□□□□□ -1.8
TNFP01375 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFP01375 AC073136.2-201ENST00000417282 849 ntBASIC3.8□□□□□ -1.8
TNFP01375 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFP01375 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.8□□□□□ -1.8
TNFP01375 RAB9AP1-201ENST00000449393 573 ntBASIC3.8□□□□□ -1.8
TNFP01375 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFP01375 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFP01375 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFP01375 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFP01375 AC124068.1-201ENST00000563131 678 ntBASIC3.8□□□□□ -1.8
TNFP01375 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFP01375 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFP01375 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
TNFP01375 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFP01375 DDX18P3-201ENST00000404856 2007 ntBASIC3.8□□□□□ -1.8
TNFP01375 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNFP01375 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.79□□□□□ -1.8
TNFP01375 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 U1.1-201ENST00000384101 164 ntBASIC3.79□□□□□ -1.8
TNFP01375 OR51A6P-201ENST00000418680 1004 ntBASIC3.79□□□□□ -1.8
TNFP01375 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.79□□□□□ -1.8
TNFP01375 AL591419.1-201ENST00000427423 339 ntBASIC3.79□□□□□ -1.8
TNFP01375 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 MTND6P5-201ENST00000448266 512 ntBASIC3.79□□□□□ -1.8
TNFP01375 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.79□□□□□ -1.8
TNFP01375 HMGN1P11-201ENST00000508668 303 ntBASIC3.79□□□□□ -1.8
TNFP01375 AC022695.1-201ENST00000522089 237 ntBASIC3.79□□□□□ -1.8
TNFP01375 UBTFL9-201ENST00000534504 1148 ntBASIC3.79□□□□□ -1.8
TNFP01375 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.79□□□□□ -1.8
TNFP01375 AC087499.8-201ENST00000578406 226 ntBASIC3.79□□□□□ -1.8
TNFP01375 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.79□□□□□ -1.8
TNFP01375 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFP01375 AC005972.3-201ENST00000606304 481 ntBASIC3.79□□□□□ -1.8
TNFP01375 AC112200.1-201ENST00000625015 234 ntBASIC3.79□□□□□ -1.8
TNFP01375 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.79□□□□□ -1.8
TNFP01375 AC012442.3-202ENST00000636742 206 ntBASIC3.79□□□□□ -1.8
TNFP01375 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TNFP01375 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFP01375 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.79□□□□□ -1.8
TNFP01375 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms